Gene SeD_A1573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1573 
Symbol 
ID6872656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1517091 
End bp1517597 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content49% 
IMG OID642784720 
Producthypothetical protein 
Protein accessionYP_002215388 
Protein GI198243145 
COG category[S] Function unknown 
COG ID[COG3012] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.9407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACCCT GGCGTTCAAC GCCGTTTTTT ATATTCAGGG AGATTATTGT GTCTCAGCCT 
TGTCCCTGTG GTAGCGCTGA CGAGTATAGC CTATGTTGTG GTCGTATTGT GTCCGGAGAA 
CGAGTAGCAC CCGATCCGTC ACATCTCATG CGCTCTCGTT ACTGCGCTTT TGTGATGAAA 
GACGCAGATT ACTTAATTAA GAGCTGGCAT CCAACCTGCA ATGCGGCCGC GTTTCGTGAT 
GATATCATCG CCGGATTTGC CAATACCAGG TGGCTCGGCC TGACTATTTT TGAACATACC 
TGGTCAGAAG CAGAAAATAC AGGGTATGTT AGTTTTATCG CGCGTTTTTC CGAACAAGGG 
AAAACCGGGG CGATTATCGA ACGTTCTCGT TTTATCAAAG AAAACGGTCA GTGGTATTAT 
ATTGACGGTA CCCGCCCGCA GTTGGGTCGA AATGATCCCT GCCCGTGCGG TTCAGGCAAA 
AAATTTAAAA AGTGCTGCGG CCAGTGA
 
Protein sequence
MPPWRSTPFF IFREIIVSQP CPCGSADEYS LCCGRIVSGE RVAPDPSHLM RSRYCAFVMK 
DADYLIKSWH PTCNAAAFRD DIIAGFANTR WLGLTIFEHT WSEAENTGYV SFIARFSEQG 
KTGAIIERSR FIKENGQWYY IDGTRPQLGR NDPCPCGSGK KFKKCCGQ