| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1564 |
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| Symbol | |
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| ID | 6875054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 1513322 |
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| End bp | 1514851 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642784716 |
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| Product | tetratricopeptide repeat protein |
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| Protein accession | YP_002215386 |
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| Protein GI | 198244980 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTTT CATCAATTTT CAAAATAATA ATATTAAATA TATTTATTTC AAAAATGGCT
CACTCTGCTG TCTGCGAGGA GCGCTATCCC CCCGACTCAG AAGAATGCCA GTACGTTCAG
GAATTAGAGC AAAAAGCGGA ACAAGGAGAT GAAAGCGCGC AGTTCGCGCT TGGAAGCTGG
TATGCGGAGG GGCGATATGT TAAGCCTGAT TATAAACTAG CCATAAAATG GCTGGAGAAA
GCGGGTAAAC AAGGTTCTGA TTTTTCCTAT TTCATCCTTG GCTATCATTA CAACTATGGT
GAAAATTTTC CACTTAGTCG ACAAAAAGCG CTGGAGTGGT ATCGCAAGGC GGCAGAGCTA
GGGGATAGTA GTACGCAAGA AATCCTCGGT GACGCCTATA TGTATGGCGA TGGGTTTCCC
CAAAATACCC AGCTAGCGCT GGAGTGGTAT CGAAAAGCCG CCTCTCCAAC CAATGATGCG
GGCGTTGTCC GCGGCCAGGG TTCAGCTTCG TCAGCACAAT TTAAGCTTGG AGTAATGTAC
GCCCACGGTC AGGGCGTCCC TCAGGATTAT CAGCAAACGG CGATCTTGAT GCGTAAAGCG
GCGGAAAATA TGTACTACCC CGCGCAACTT TATCTCGGTG TTGCCTATTT TTATGGTGAA
GGCGTGCCTC AGGATTATCG TCAGGCAGTT TACTGGCTTA ATGAAGGTAT ACCAAGCAGC
TATACGCCAG GCCACATTCC GCTGAATGCG CTCTATGATA AAGCGCATCC CGCTGACCAG
GTTCACTCTC AGACGTGGTA TCGAAAAACA GCGCAACGCG TGATGGCAAA GGTACAGTAC
AATTTTGGCG TATGGTATTA CAACGGTTAT CACTTATTGA AAGATCACAA CCTGGCGCTG
GAGTGGTATC GCAGAGCCGC AGCGCAAGGA TTGGCCGAGG CGCAGGATGC GATCGGCGTG
ATGTTTATGC AGGGTGAGGG CGTATCTCAG GACTACCAAC AGGCGCTGGC GTGGTATCGC
AAAGCCGCAC GCCAGGGACT GCCTGCTGCG CAAACGCATC TGGGCATCAT GTCTGCTTTT
GGTCGCGGCG TCGCGCAAAG CGACAGACAG GCTATCGCAT GGTATCGAAA AGCAGCAAAA
CAGGATTTTG CGAAAGCGCA ATATCAGCTT GGCGTAGCAT ATAGCACGGG AAGAGGCGTG
CCTGAAAATA GCCGGAATGC GCTGAAGTGG TACCTTAAAG CGGCAGAGCA GGGGTTTACT
CCGGCACAAT TAGCGCTTGG GGAAATTTAT GCTCATGGGC GCCAGGGGGT GCCTAAAGAT
AATAAGCAGG CCTATATTTG GTATTACATG GCAAGTATAT ATACGGAAAA ATCTAAGGAT
GATTGTTCAG CGCTCATTGC CGAAAGAAAC CGACTCAAGG GAACGCTTAC CCCAGATCAA
CTTAGCGAGA CATATGCCGC CTTTGATCTC ATCAGGCGAA AAATCAACCA GTCAAAGGAG
GCGAAAAAGA TTGCCAGGAA GAAGTATTGA
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| Protein sequence | MRFSSIFKII ILNIFISKMA HSAVCEERYP PDSEECQYVQ ELEQKAEQGD ESAQFALGSW
YAEGRYVKPD YKLAIKWLEK AGKQGSDFSY FILGYHYNYG ENFPLSRQKA LEWYRKAAEL
GDSSTQEILG DAYMYGDGFP QNTQLALEWY RKAASPTNDA GVVRGQGSAS SAQFKLGVMY
AHGQGVPQDY QQTAILMRKA AENMYYPAQL YLGVAYFYGE GVPQDYRQAV YWLNEGIPSS
YTPGHIPLNA LYDKAHPADQ VHSQTWYRKT AQRVMAKVQY NFGVWYYNGY HLLKDHNLAL
EWYRRAAAQG LAEAQDAIGV MFMQGEGVSQ DYQQALAWYR KAARQGLPAA QTHLGIMSAF
GRGVAQSDRQ AIAWYRKAAK QDFAKAQYQL GVAYSTGRGV PENSRNALKW YLKAAEQGFT
PAQLALGEIY AHGRQGVPKD NKQAYIWYYM ASIYTEKSKD DCSALIAERN RLKGTLTPDQ
LSETYAAFDL IRRKINQSKE AKKIARKKY
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