Gene SeD_A1550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1550 
SymbolsirB1 
ID6874249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1496465 
End bp1497274 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content49% 
IMG OID642784702 
Productputative transcriptional regulator 
Protein accessionYP_002215372 
Protein GI198244208 
COG category[S] Function unknown 
COG ID[COG2912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.15312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTCGT TAGCTGATTT CGAATTTAAC AATGCGCCGC TGTGTGATGG CATGATCCTG 
GCATCAGAGA TGATTCGCCT GGATTTTCCC ACGCAGTTTG TCTACGACGA ACTGGAACGT
CTGGTCAGTC TGGCGCAGGA AGAAATTAGC CAGCTCCTGT CTCAGGATGA GCAACTGGAA
AAATTGCTGG CACTTTTTTA CGGCGAGTGG GGGTTCACGG ACTCCCGCGG CGTCTACCGT
CTTTCTGATG CTTTATGGCT CGATAAAGTC CTGAAAAAAC GCCAGGGTAG CGCGGTATCG
TTGGGCGCTA TTTTATTATG GATAGCAAAC CGTCTTGATT TGCCGTTGGT GCCCGTTATC
TTCCCAACGC AGTTGATTTT GCGTATTGAA TCGCTGGAAG GGGAAATGTG GCTGATTAAC
CCGTTCAACG GTGAAACGCT TGATGAACAT ACCCTCGAAG TCTGGTTAAA AGGCAATATT
AGTCCGGTCG CCGAGTTGTT TAACGAAGAT TTGGACGAGG CGGATAACGC CGAAGTGATT
CGTAAGCTAC TGGATACGCT GAAATCCTCG CTGATGGAGG AACGGCAAAT GGAGCTGGCG
CTACGCGTTA GCGAAGCATT GTTGCAATTT AACCCGGAAG ATCCTTACGA AATCCGTGAC
CGCGGGTTGA TCTACGCGCA GCTTGAGTGT GAACACGTTG CGCTGACTGA TTTAAGCTAC
TTCGTTGAAC AGTGTCCGGA AGACCCGATC AGCGAAATGA TTCGTGCGCA GATCAACACC
ATTGCGCACA AGCAAATTGT TCTACATTAA
 
Protein sequence
MRSLADFEFN NAPLCDGMIL ASEMIRLDFP TQFVYDELER LVSLAQEEIS QLLSQDEQLE 
KLLALFYGEW GFTDSRGVYR LSDALWLDKV LKKRQGSAVS LGAILLWIAN RLDLPLVPVI
FPTQLILRIE SLEGEMWLIN PFNGETLDEH TLEVWLKGNI SPVAELFNED LDEADNAEVI
RKLLDTLKSS LMEERQMELA LRVSEALLQF NPEDPYEIRD RGLIYAQLEC EHVALTDLSY
FVEQCPEDPI SEMIRAQINT IAHKQIVLH