Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A1544 |
Symbol | lolB |
ID | 6871341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 1491926 |
End bp | 1492549 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642784696 |
Product | outer membrane lipoprotein LolB |
Protein accession | YP_002215366 |
Protein GI | 198243441 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0381388 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.080998 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGC CCGATTTTCG CCTGATTCGT CTACTGCCGT TAGCAAGCCT GGTTCTCACC GCCTGTACGC TTCCTGGGCA TAAAGGCCCG GGCAAGAGCC CGGATTCCCC TCAGTGGCGC CAGCATCAGC AAGAGGTGCG TCATCTGAAT CAATACCAGA CGCGCGGCGC CTTTGCTTAC ATCTCAGATG ATCAGAAAGT CTATGCGCGC TTCTTCTGGC AACAGACCGG ACAGGATCGC TACCGCCTGC TGCTTACCAA CCCGCTGGGC AGCACCGAGC TGGAGCTTAA CGCCCAGCCG GGCAACGTCC AGTTGGTGGA TAACAAAGGC CAGCGTTATA CCGCCGATGA CGCCGAAGAG ATGATCGGCA AACTCACCGG GATGCCGATT CCGTTAAACA GCCTGCGGCA GTGGATCCTC GGTCTGCCTG GCGATGCCAC TGACTACAAA CTGGACGACC AGTACCGCCT GAGCGAAGTG AACTATCGCC AGGATGGTAA AAACTGGAAA GTGGTTTACG GTGGCTATGA CAGCAAAACG CAGCCTGCCA TGCCTGCCAA TATGGAGCTT TCCGACGGCA GTCAGCGCAT TAAGCTGAAA ATGGATAACT GGATTGTGAA ATGA
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Protein sequence | MTLPDFRLIR LLPLASLVLT ACTLPGHKGP GKSPDSPQWR QHQQEVRHLN QYQTRGAFAY ISDDQKVYAR FFWQQTGQDR YRLLLTNPLG STELELNAQP GNVQLVDNKG QRYTADDAEE MIGKLTGMPI PLNSLRQWIL GLPGDATDYK LDDQYRLSEV NYRQDGKNWK VVYGGYDSKT QPAMPANMEL SDGSQRIKLK MDNWIVK
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