| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1543 |
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| Symbol | ipk |
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| ID | 6871891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1491078 |
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| End bp | 1491926 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642784695 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_002215365 |
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| Protein GI | 198242110 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00558855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.0908777 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCATT GGCCTTCTCC GGCAAAATTA AATCTGTTTT TATATATCAC CGGACAGCGT
GCAGACGGCT ACCACACGCT GCAGACGCTG TTTCAGTTTC TGGATTATGG CGACACACTC
CACATCGAAC CGCGTCGCGA TGGCGAAATC CATTTATTAA CGCCGGTAAC CGGCGTTGAA
AATGAAGACA ACCTGATCGT CCGCGCCGCG CGGCTGTTGA TGAAAGTCGC CTCGGAGAGT
GGACGCCTGC CCGCCGGAAG CGGCGCGGAT ATCAGCATTG AGAAGCGCCT TCCCATGGGC
GGCGGTCTGG GCGGCGGCTC GTCTAACGCC GCGACCGTTC TGGTGGCGCT CAATCATCTT
TGGCAATGCG GGCTTTCCAT TGATGAACTG GCGACGCTCG GCCTGACGCT CGGCGCCGAC
GTCCCGGTCT TTGTTCGTGG CCACGCCGCG TTTGCCGAAG GCGTAGGCGA AATATTAACG
CCGGTGAATC CGCCGGAAAA ATGGTATCTG GTCGCGCACC CTGGCGTAAG CATTCCGACG
CCGGTTATCT TTAAAGATCC TCAATTGCCG CGTAATACGC CAAAAAGGTC AATAGATACG
TTACTAAAAT GTGAATTCAG CAATGATTGC GAGGTTATCG CAAGAAAACG TTTTCGCGAG
GTTGATGCGG CGCTTTCCTG GCTGTTAGAA TACGCGCCGT CGCGCCTGAC TGGGACAGGG
GCCTGTGTCT TTGCTGAATT CGATACAGAG TCTTGTGCTC GCCAGGTGCT TGAGCAAGCC
CCGGAATGGC TCAATGCTTT TGTGGCGAAG GGTGTCAACC TTTCCCCATT GCATCGAGAG
TTACTCTAA
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| Protein sequence | MTHWPSPAKL NLFLYITGQR ADGYHTLQTL FQFLDYGDTL HIEPRRDGEI HLLTPVTGVE
NEDNLIVRAA RLLMKVASES GRLPAGSGAD ISIEKRLPMG GGLGGGSSNA ATVLVALNHL
WQCGLSIDEL ATLGLTLGAD VPVFVRGHAA FAEGVGEILT PVNPPEKWYL VAHPGVSIPT
PVIFKDPQLP RNTPKRSIDT LLKCEFSNDC EVIARKRFRE VDAALSWLLE YAPSRLTGTG
ACVFAEFDTE SCARQVLEQA PEWLNAFVAK GVNLSPLHRE LL
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