Gene SeD_A1541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1541 
Symbolprs 
ID6873386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1489865 
End bp1490812 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content55% 
IMG OID642784693 
Productribose-phosphate pyrophosphokinase 
Protein accessionYP_002215363 
Protein GI198244774 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0462] Phosphoribosylpyrophosphate synthetase 
TIGRFAM ID[TIGR01251] ribose-phosphate pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.049338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.157535 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGATA TGAAGCTTTT TGCTGGTAAC GCCACCCCGG AACTAGCACA ACGTATTGCC 
AACCGCCTGT ACACTTCTCT CGGCGACGCC GCCGTAGGTC GCTTTAGCGA CGGCGAAGTC
AGCGTACAAA TCAACGAAAA TGTACGCGGT GGTGATATTT TCATCATCCA GTCCACTTGT
GCCCCAACCA ACGACAACCT GATGGAATTG GTCGTTATGG TTGATGCCCT GCGTCGTGCT
TCCGCAGGTC GTATCACCGC CGTTATCCCC TACTTTGGCT ATGCACGTCA GGACCGTCGC
GTACGTTCCG CCCGTGTGCC GATTACCGCA AAAGTTGTCG CTGACTTCCT GTCCAGCGTC
GGCGTTGACC GCGTTCTCAC CGTAGATCTG CATGCTGAAC AGATCCAGGG CTTCTTTGAC
GTTCCGGTTG ATAACGTGTT CGGTAGCCCA ATCCTGCTCG AAGATATGCT GCAACTGAAT
CTGGATAACC CGATCGTGGT TTCCCCGGAT ATTGGCGGCG TGGTTCGTGC CCGCGCTATC
GCTAAGCTGC TGAACGATAC CGATATGGCT ATCATTGATA AACGTCGTCC GCGCGCGAAC
GTTTCTCAGG TGATGCACAT CATCGGCGAC GTCGCTGGCC GTGACTGCGT GCTGGTTGAT
GATATGATCG ATACCGGCGG TACTCTGTGC AAAGCAGCAG AAGCATTGAA AGAACGTGGC
GCTAAACGCG TGTTTGCCTA CGCGACGCAC CCGATCTTCT CAGGCAATGC GGCAAACAAC
CTGCGCAACT CCGTCATTGA TGAAGTCGTT GTCTGCGACA CCATTCCGCT GACCGACGAA
ATCAAAGCGC TGCCGAACGT GCGTACCTTG ACCCTGTCAG GTATGCTGGC CGAAGCGATT
CGCCGTATCA GCAACGAAGA ATCGATTTCC GCCATGTTCG AGCATTGA
 
Protein sequence
MPDMKLFAGN ATPELAQRIA NRLYTSLGDA AVGRFSDGEV SVQINENVRG GDIFIIQSTC 
APTNDNLMEL VVMVDALRRA SAGRITAVIP YFGYARQDRR VRSARVPITA KVVADFLSSV
GVDRVLTVDL HAEQIQGFFD VPVDNVFGSP ILLEDMLQLN LDNPIVVSPD IGGVVRARAI
AKLLNDTDMA IIDKRRPRAN VSQVMHIIGD VAGRDCVLVD DMIDTGGTLC KAAEALKERG
AKRVFAYATH PIFSGNAANN LRNSVIDEVV VCDTIPLTDE IKALPNVRTL TLSGMLAEAI
RRISNEESIS AMFEH