Gene SeD_A1527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1527 
Symbol 
ID6873361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1477389 
End bp1478237 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content59% 
IMG OID642784679 
Producthydrogenase-1 operon protein HyaF 
Protein accessionYP_002215349 
Protein GI198242199 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.912059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value0.309367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACG CCTTTTTTCA TCTGCTGGGG CCAGGTACGC AGCCTGATGA CGCTAGTTTC 
TCGATGAATC CCTTACCGCT CACCTGTCAG GTCAATGGCG ACCCAAGTAT GGCGGCGCTG 
GAGCGCTGCG CTCACAGCCC GGCGGTGATG GCATTGTTGA CCGATCTGCG AGGTCAGCTT 
GCCCGGCGCA TCCCGGAAGT CGGCGACGTG CTGGGATGGG AGTTATCTCC CCTGAATGCC 
GATGATCTCT CATTCCTCAA TACGCTATTG GGCGAAGGCG AAGTCTCGGT ACGCATTCAG 
CATCCGGACG GGAGTGAAAG CGAGATCCAG GAGACCATCT TCTGCGGCCT GTGGCGGGTA 
CGCCATCTGC ATAACCGACG TCTGCTGACG GATCGTCTGG AAGCGGGTAG CGCGCCCCTG 
ACATTATGGC AAGCGGCTAC CGCCGATACG CTGCCTGACG ACTCTCTACT GCCTCCGCCT 
GTCGCTGGCC TGATGAATGG ACTGCCGCTG GCCCATGAAT TATTGGCGCA CGTACGCGAT 
CCGGCGTTGC AACCTCACAG CATCAATTTG ACCCAACTGC CGCTCAGCGA GGCCGATCGC 
CTTTTTCTGG CGCGTTTATG CGGACACGGG AACATCCAGA TTCGCATCTC CGGGTATGGC 
GAAAGCCAAA TCAACGCCAC AGCATTGCGC CATCTCTGGC ATGTGCGCTG TCTGGACGCC 
CTTAAAGGGC CATTGCTCGA TAGCTATGAG ATTTGTCTTT TGCCGGAGCT GGTACTGGCG 
GCCCCGGAAG ATCTGGCCGA TTCGCGCCAG CGCCTGGATG AAGTCTGCCG ATGGCTGGAG 
ACGCGCTAA
 
Protein sequence
MSNAFFHLLG PGTQPDDASF SMNPLPLTCQ VNGDPSMAAL ERCAHSPAVM ALLTDLRGQL 
ARRIPEVGDV LGWELSPLNA DDLSFLNTLL GEGEVSVRIQ HPDGSESEIQ ETIFCGLWRV 
RHLHNRRLLT DRLEAGSAPL TLWQAATADT LPDDSLLPPP VAGLMNGLPL AHELLAHVRD 
PALQPHSINL TQLPLSEADR LFLARLCGHG NIQIRISGYG ESQINATALR HLWHVRCLDA 
LKGPLLDSYE ICLLPELVLA APEDLADSRQ RLDEVCRWLE TR