| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1525 |
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| Symbol | cydB |
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| ID | 6872411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1474622 |
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| End bp | 1475758 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642784677 |
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| Product | cytochrome D ubiquinol oxidase, subunit II |
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| Protein accession | YP_002215347 |
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| Protein GI | 198245960 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 0.683036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGATT ATGAAACGTT GCGGTTCATT TGGTGGCTGC TGATCGGCGT CATCCTGGTG
GCATTTATGG TAACTGACGG GTTTGATATG GGTGTCGGTT GCCTGCTCCC GCTGATAGCG
CGCAACGATG ACGAACGCCG GGTATTGATC AATAGCGTGG GCGCCCACTG GGAAGGAAAC
CAGGTATGGT TGATTCTCGC GGGCGGGGCA TTATTCGCCG CCTGGCCACG GGTCTATGCC
GCCGCGTTTT CCGGTTTTTA TGTGGCGATG ATCCTGGTGC TGTGTGCCCT CTTCTTTCGC
CCGCTGGCCT TTGATTATCG GGGTAAAATC GCCAATGCCC GCTGGCGCGC GCTGTGGGAT
ACCGGTCTGG TTATCGGCAG CCTGGTTCCC CCAGTCGTAT TCGGCATCGC GTTCGGCAAC
CTGTTTTTAG GCGTGCCGTT TGCCTTCACG CCGCAGCTTC ATGTTGACTA TTTTGGCACC
TTCTGGCAGT TACTCTCGCC CTTTGCCCTA CTGTGTGGAT TATTGAGCCT GTCGTTGGTG
ATTATGCAAG GAGGCGTCTG GTTACAGTTG AAAACGGAGG GCGTTATTCG TCAACGGGCT
CTGTCGGCCA CCCGCCACAG CGCGCTGCTG ATCGTGATCT GCTTCCTGCT GGCCGGTTAC
TGGCTGTGGG CCGGCGTTGA TGGCTTTGTC TTGCTCACGC AGGATGCCAA CGGCCCTTCC
AATCCGCTCT TAAAAGGCGT GGCGATACTC CCTGGCGCAT GGATGAACCA CTTTATACGC
TCGCCGCTAC TGCTCATCAT CCCGTTGCTC GGTATGATCC TGCCGATTCT GGCTTTCTAT
GCCTGCCTTC GCGGTCAGAC TATTCGTGGA TTTCTGTTCG CTTCCCTGAC CCAGGCCTGC
GTCATCTTTA CCGCCGGCAT AACGCTATTT CCTTTTGTGA TGCCGTCGAG TGTTAGTCCT
CTCTCCAGCC TGACGGTGTG GGACAGCACC TCCAGCCAGA TGACGCTCGA AATCATGCTG
GTGATTGTGC TGATTTTTCT GCCAATCGTA CTGCTCTATA CGCTGTGGAG CTATTACAAA
ATGTTGGGGC GTATCAACCT GGAGACCCTC CGCCGCAACG ATCATGAACT TTATTAG
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| Protein sequence | MLDYETLRFI WWLLIGVILV AFMVTDGFDM GVGCLLPLIA RNDDERRVLI NSVGAHWEGN
QVWLILAGGA LFAAWPRVYA AAFSGFYVAM ILVLCALFFR PLAFDYRGKI ANARWRALWD
TGLVIGSLVP PVVFGIAFGN LFLGVPFAFT PQLHVDYFGT FWQLLSPFAL LCGLLSLSLV
IMQGGVWLQL KTEGVIRQRA LSATRHSALL IVICFLLAGY WLWAGVDGFV LLTQDANGPS
NPLLKGVAIL PGAWMNHFIR SPLLLIIPLL GMILPILAFY ACLRGQTIRG FLFASLTQAC
VIFTAGITLF PFVMPSSVSP LSSLTVWDST SSQMTLEIML VIVLIFLPIV LLYTLWSYYK
MLGRINLETL RRNDHELY
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