Gene SeD_A1520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1520 
Symbol 
ID6871121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1469705 
End bp1470439 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content52% 
IMG OID642784672 
ProductYcgR family protein 
Protein accessionYP_002215342 
Protein GI198246183 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5581] Predicted glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGGTT ACAATGAGCA GTTCCTGAAA AAAAATCCAT TAGCGATATT AGGCGTGCTA 
CGGGATTTAA ATAAAAATCA GGTTCCACTG CGTATTTCAT GGGCGCATGG TCAATTCATT 
AGTAAAATTT TGGCGGTAGA CCCGGAAAAA CTCATCGTGG ATTACGGCAG CCAGGAATAT 
GAAAATAGCG CCGTATTACG TGCCGGGCAG GTAGCCATTA TCGCAGAAAC ACAGGGCGCA 
AAAGTCGAGT TCACGTTGCC GCAACTCGTT ACAGGCGAAT ATCAGCGGCT GCCGGCCTTT 
ATCACGCCCC TGCCGTCGTC ACTGTGGTTT GTCCAGCGCC GGGAGTATTT TCGTATTGGC 
GCGCCGCTGT ATCCGCCTTA TTACGGCGTC ACCACGCTAC CGGACACCCG TACGTTACGT 
TTTCGCCTGT TTGATCTTTC CCTGGGCGGC ATGGGCGCGC TACTGGAATC CGCCATCCCC 
GACGGACTAA TCGAAGGCGC GCGCTTTTCG CAGGTTGAAC TGAACATGGG GCCATGGGGT 
ATTTTTCACG TTGACGCCCA GCTTATCGCC ATCAGCGAGC GTAAGGTGAT TGATGGGAAA 
AATGAAACGA TCACCACTCC CCGCCTGAGC TTTCGTTTCC TTAACGTCAG CCCGGCGGTA 
GAGCGGGAGT TGCAGCGGAT TATTTTTTCG CTTGAGCGCG AGGCCCGAGA AAGAGCGAAT 
AAAGTGCGAG AATAA
 
Protein sequence
MSGYNEQFLK KNPLAILGVL RDLNKNQVPL RISWAHGQFI SKILAVDPEK LIVDYGSQEY 
ENSAVLRAGQ VAIIAETQGA KVEFTLPQLV TGEYQRLPAF ITPLPSSLWF VQRREYFRIG 
APLYPPYYGV TTLPDTRTLR FRLFDLSLGG MGALLESAIP DGLIEGARFS QVELNMGPWG 
IFHVDAQLIA ISERKVIDGK NETITTPRLS FRFLNVSPAV ERELQRIIFS LEREARERAN 
KVRE