Gene SeD_A1496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1496 
Symbol 
ID6871966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1449247 
End bp1449942 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content61% 
IMG OID642784650 
Productglycoprotease family protein 
Protein accessionYP_002215320 
Protein GI198245572 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.764772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATTC TGGCTATCGA TACCGCCACA GAGGCCTGTT CTGTCGCCCT GTGGAACAAC 
GGTACTATCA ATGCTCACTT TGAGCTTTGT CCACGAGAAC ACACTCAACG TATCCTGCCC
ATGGTGCAGG AGATTCTGGC CGCCAGCGGC GTCTCGCTCA ATGAGATAGA TGCGCTGGCG
TTTGGGCGCG GTCCGGGCAG CTTTACCGGC GTGCGTATCG GCATTGGGAT TGCGCAAGGG
CTGGCGTTAG GGGCAAATCT GCCGATGATC GGTGTTTCGA CGCTTGCCAC GATGGCGCAG
GGCGCGTGGC GTAAAACCGG CGCGACCCGC GTACTCGCCG CGATTGACGC GCGGATGGGC
GAAGTGTACT GGGCGGAATA CCAGCGTGAT GCGCAGGGCG TCTGGCAGGG CGAAGAGACG
GAAGCGGTGC TGAAACCGGA ACGGGTCGGT GAGCGGTTGA AACAGCTTTC CGGCGAGTGG
GCGACGGTAG GAACGGGTTG GTCCGCATGG CCCGATCTGG CGAAGGAGTG CGGCCTGACG
CTTCATGATG GGGAGGTGTC GCTCCCGGCA GCGGAAGATA TGTTGCCCAT CGCCAGTCAA
AAGCTGGCGG CAGGAGAGAC CGTTGCCGTG GAACATGCCG AGCCGGTTTA TTTGCGTAAC
GAAGTGGCGT GGAAGAAACT TCCCGGCAAA GAATGA
 
Protein sequence
MRILAIDTAT EACSVALWNN GTINAHFELC PREHTQRILP MVQEILAASG VSLNEIDALA 
FGRGPGSFTG VRIGIGIAQG LALGANLPMI GVSTLATMAQ GAWRKTGATR VLAAIDARMG
EVYWAEYQRD AQGVWQGEET EAVLKPERVG ERLKQLSGEW ATVGTGWSAW PDLAKECGLT
LHDGEVSLPA AEDMLPIASQ KLAAGETVAV EHAEPVYLRN EVAWKKLPGK E