Gene SeD_A1473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1473 
Symbol 
ID6871299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1429241 
End bp1430032 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content49% 
IMG OID642784628 
Producttranscriptional regulator KdgR 
Protein accessionYP_002215298 
Protein GI198245963 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0115946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.370857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACG CAGATCTGGA TAAGCAGCCT GATTCTGTAT CTTCTGTGCT GAAAGTTTTC 
GGCATTCTGC AGGCGCTGGG TGAAGAGCGT GAAATAGGGA TTACCGAGCT ATCGCAGCGC 
GTCATGATGT CGAAAAGCAC CGTTTATCGC TTTTTGCAAA CCATGAAAAC GCTGGGCTAC 
GTGGCTCAGG AGGGGGAGTC TGAAAAATAC TCTCTGACGC TAAAGCTGTT TGAGCTGGGC 
GCGCGAGCTT TGCAAAATGT TGATCTCATC CGCAGTGCGG ACATTCAGAT GCGCGAACTG 
TCTCGTCTGA CAAAAGAAAC TATCCATCTT GGCGCGCTGG ATGAAGACAG CATTGTCTAT 
ATCCATAAAA TTGACTCTAT GTACAATCTG CGGATGTACT CACGTATTGG GCGTCGTAAT 
CCGCTGTACA GTACGGCCAT CGGTAAAGTG CTTCTGGCCT GGCGCGACCG TGATGAGGTT 
AAGCAGATTC TCGACGGCGT AGAGTATAAG CAAAGCACGG GACGCACGAT TACCAGCACT 
GAAGCGTTGC TGCCGCTGTT GGATGAAGTG CGTGCGCAAG GATACGGTGA AGATAACGAA 
GAACAGGAAG AAGGATTACG TTGTATCGGC GTACCGGTAT TTGACCGTTT TGGCGTAGTC 
ATCGCAGGGT TAAGCATTTC GTTCCCGACG CTGCGTTTTT CAGAAGAACG CCTACAGGAA 
TATGTGGCTA TGTTACACGC CGCCGCGCGT AAAATTTCTG AACAAATGGG TTACAACGAT 
TATCCCTTCT AA
 
Protein sequence
MANADLDKQP DSVSSVLKVF GILQALGEER EIGITELSQR VMMSKSTVYR FLQTMKTLGY 
VAQEGESEKY SLTLKLFELG ARALQNVDLI RSADIQMREL SRLTKETIHL GALDEDSIVY 
IHKIDSMYNL RMYSRIGRRN PLYSTAIGKV LLAWRDRDEV KQILDGVEYK QSTGRTITST 
EALLPLLDEV RAQGYGEDNE EQEEGLRCIG VPVFDRFGVV IAGLSISFPT LRFSEERLQE 
YVAMLHAAAR KISEQMGYND YPF