Gene SeD_A1468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1468 
Symbol 
ID6872602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1423221 
End bp1423718 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content54% 
IMG OID642784624 
ProductGAF domain-containing protein 
Protein accessionYP_002215294 
Protein GI198245505 
COG category[T] Signal transduction mechanisms 
COG ID[COG1956] GAF domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000132233 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.144363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAA CAGAACTATA CGCGGCGTTA AACCGCGATT TTCAGTCGTT AATGGCAGGT 
GAAACCAGCT TTCTGGCCAC GCTGGCGAAT ACCAGCGCGC TACTGTTCGA ACGCCTTACC
GAGGTGAACT GGGCGGGATT TTATCTCCTC GAAGGCGATA CGCTGGTGTT GGGGCCGTTT
CAGGGGCGAA TCGCCTGTGT GCGGATTCCG GTTGGTCGCG GCGTGTGTGG CGCAGCGGTA
GCGCAGAATA AGGTTCAACG TATTGATGAT GTTCATGCGT TTGACGGCCA TATTGCCTGT
GATGCCGCCA GCAACGCCGA AATTGTGCTG CCTGTCACGG TTGGCGAACG GATTATCGGC
GTGCTGGATA TAGATAGCAC AGCGTTTGGC CGTTTTACCG AAGAAGATGA ACACGGCCTG
CGTACGCTGG TCGCACAGCT TGAAACCGTG CTTGCAACGA CGGATTACAA AAAATTCTTT
GCGAGCGTTG CAGGATAA
 
Protein sequence
MSKTELYAAL NRDFQSLMAG ETSFLATLAN TSALLFERLT EVNWAGFYLL EGDTLVLGPF 
QGRIACVRIP VGRGVCGAAV AQNKVQRIDD VHAFDGHIAC DAASNAEIVL PVTVGERIIG
VLDIDSTAFG RFTEEDEHGL RTLVAQLETV LATTDYKKFF ASVAG