Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A1467 |
Symbol | |
ID | 6873111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 1421809 |
End bp | 1423092 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642784623 |
Product | PqiA family integral membrane protein |
Protein accession | YP_002215293 |
Protein GI | 198243288 |
COG category | [S] Function unknown |
COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
TIGRFAM ID | [TIGR00155] integral membrane protein, PqiA family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00123019 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.152719 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCTGA ACACCTCACA CGTCACGCCA ACAAAAAAGC TAACGATCAG GTCAATTAGC GAAGCGCTGC CGCGCAGCCA CTACCAGCGC TGCCCTGAAT GCGACATGCT GTTCAGCTTG CCGGAGATGA GCGCTCATCA AAGCGCTTAT TGTCCTCGTT GCCAGGCCAA AATTCGCGAT GGGCGCGACT GGTCGCTGAC GCGGCTGACC GCGATGGCGG TAACCATGCT GCTATTGATG CCGTTTGCCT GGAGCGAACC GTTACTCCAT ATCTACCTGT TGGGCGTACG CATTGATGCC AATGTGATGC ACGGCATCTG GCAAATGACG CAGCAGGGCG ATCCGTTAAC CGCCGCAATG GTGCTCTTTT GCGTGGTGGG CGCGCCGCTT ATTCTGGTTT TTTCAATTGC TTACCTGTGG TTTGGCAGCC TCCTCGGCAT GAATCTGCGT CCAGTCCTGC TGATGCTGGA AAAACTGAAA GAGTGGGTGA TGCTGGACAT CTATCTGGTC GGTATTGGCG TTGCCTCTAT CAAAGTGCAG GACTATGCCT TTCTGCAGCC GGGCATCGGG CTTTTAGCGT TCGTCTCGTT GGTGGTTCTT AGCATTCTGA CTATGATTCA TCTGAATGTG GAGCAACTAT GGGAACGATT TTATCCGCAG CGCCCTGCTC AACGTGCGGA CGAAAGATTG CGCGTCTGTC TTGGCTGCCA CTTTAGCGGC TATCCGGATG CGAAAGGACG CTGCCCGCGT TGTCATATTC CGCTACGGTT ACGCAGAAAA CAGAGCATAC AGAAGTGTTG GGCGGCCTTG CTGGCGTCTA TTGTCTTTTT GCTGCCGGCA AACCTGCTGC CTATCTCGGT AATCTACATT AATGGCGGGC GTCAGGAAGA TACTATCCTG TCGGGCATTA TGTCGCTTGC CAGCAGCAAT ATCGCCGTCG CCGCCGTCGT TTTTATCGCC AGTATTTTGG TGCCGTTTAC CAAAGTCATC GTGATGTTTA CGCTACTGTT GAGTATCCAT TTTAAATGCC AACAGGGACT GCGGACGCGA ATTCTGTTGC TGCGTCTGGT GACATGGATA GGCCGTTGGT CGATGCTGGA TCTTTTCGTT ATCTCGTTAA CCATGTCTCT GATTAATCGC GATCAGATTC TGGCTTTTAC TATGGGACCG GCTGCGTTTT ATTTCGGCGC AGCGGTAATT TTGACTATTC TTGCAGTGGA ATGGCTGGAT AGCCGCTTAC TTTGGGATGC ACATGAGTCA GGAAACGCCC GCTTCGAAGA CTGA
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Protein sequence | MALNTSHVTP TKKLTIRSIS EALPRSHYQR CPECDMLFSL PEMSAHQSAY CPRCQAKIRD GRDWSLTRLT AMAVTMLLLM PFAWSEPLLH IYLLGVRIDA NVMHGIWQMT QQGDPLTAAM VLFCVVGAPL ILVFSIAYLW FGSLLGMNLR PVLLMLEKLK EWVMLDIYLV GIGVASIKVQ DYAFLQPGIG LLAFVSLVVL SILTMIHLNV EQLWERFYPQ RPAQRADERL RVCLGCHFSG YPDAKGRCPR CHIPLRLRRK QSIQKCWAAL LASIVFLLPA NLLPISVIYI NGGRQEDTIL SGIMSLASSN IAVAAVVFIA SILVPFTKVI VMFTLLLSIH FKCQQGLRTR ILLLRLVTWI GRWSMLDLFV ISLTMSLINR DQILAFTMGP AAFYFGAAVI LTILAVEWLD SRLLWDAHES GNARFED
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