Gene SeD_A1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1466 
Symbol 
ID6874250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1419207 
End bp1421840 
Gene Length2634 bp 
Protein Length877 aa 
Translation table11 
GC content55% 
IMG OID642784622 
Productmce-related protein 
Protein accessionYP_002215292 
Protein GI198243769 
COG category[R] General function prediction only 
COG ID[COG3008] Paraquat-inducible protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.62714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.15186 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGG AAACGCCCGC TTCGAAGACT GAAGCGCAAA TTAAAACCAA ACGCCGTATT 
TCACCTTTCT GGCTGCTACC GCTTATCGCG CTAATGATCG CGGGGTGGCT GGTATGGGAT
AGCTACCAGG ATCGCGGCAA TAGCGTGACT ATCGATTTTA TGTCGGCGGA CGGTATCGTA
CCGGGCCGTA CTCCCGTGCG TTATCAGGGA GTAGAAGTCG GCACCGTGGA AGATGTCAGT
CTGAGCAAAG ATCTGCGCAA AATTGAAGTT CGCGTCAGTA TCAAATCAGA TATGGAAGAT
GCGTTGCGCG AAGAGACGCA ATTCTGGCTG GTGACGCCCA AAGCCTCGCT GGCGGGCGTT
TCCGGCCTGG ATGCGTTGGT CGGCGGGAAT TACATCGGTA TGATGCCAGG TAAAGGCAAG
CCCAGAGATC ATTTCGTCGC CCTGGATACA CAGCCTAAAT ACCGGCTTAG CAACGGCGAT
CTGATGATTC ATCTCAATGC GCCGGATCTC GGTTCGCTTA ATAGCGGTTC ACTGGTCTAT
TTCCGTAAAA TCCCTGTCGG ACGGGTGTAT GACTATTCGA TTAACCCTAA CAAACAGGGC
GTGACGATTG ACGTTCTGAT TGAGCGACGG TTTACCGATC TGGTGAAAAA AGGCAGCCGT
TTTTGGAATG TCTCCGGCAT TGACGCCGAT CTAAGCCTGA GCGGCGCGAA GGTGAAACTG
GAGACCCTCG CGGCCCTGGT CAATGGCGCG ATTGCGTTTG ACTCACCGGA CAATTCCAAA
CCCGCCGCCC AGGATGACAC GTTCGGCTTA TATAAAGATT TAGCCCACAG CCAACGAGGG
GTAATCGTTA AACTTGAGCT GCCCAGCGGA GACGGTCTGA AAGCGGAATC TACGCCGCTC
ATGTACCAGG GACTGGAGGT GGGTGAGCTT TCTAAACTGA CGCTCAACCC TGGCGGTAAA
GTCACCGGAG AGATGACCGT CGATCCCAGC GTTGTTCCGC TGATGCGGGA AAATACGCGT
ATTGAGTTAC GCAATCCCAA ACTGTCGCTG AGCGACGCGA ATATCAGTTC GTTGTTAACC
GGAAAAACCT TCGAGCTGGT GCCGGGCGAC GGCGAACCGC GCAGTGAATT TGTGGTGGTG
CCGGGTGAAA AGGCCCTGCT GCATGAGGCG AATGCCTTAA CCCTGACGCT GACGGCCCCG
GAAAGTTACG GCATCGAACC GGGCCAGCCG TTAATTTTAC ATGGCGTAAA AATTGGCCAG
GTCATTGAGC GCAACTTATC CAGTAAAGGC GTGTCATTCA CCGTCGCGAT TGAACCGCAG
CACCGGGATT TGGTACAGGG CGACAGTAAA TTCGTGGTCA ACAGCCGGGT GGATGTCAAA
GTCGGCCTTG ACGGCGTAGA GTTCCTCGGC GCCAGCGCCA GCGAGTGGAT TGACGGCGGA
ATTCGTATTT TACCCGGTAC GAGCGGGAAG ATGAAATCCA CCTACCCGCT CTATGCTAAC
CTGGAAAAAG CGCTGGAAAA TAGTCTCAGT GACTTACCGA CTACCACCCT GACGCTGACA
GCCGAAACGT TGCCGGATGT CCAGGCAGGT TCCGTCGTGC TGTATCGAAA ATTTGAAGTA
GGCGAAGTCA TCACCGTTCG CCCACGCGCC AATACCTTTG ACATCGACCT GCATATTAAG
CCGGAATATC GCCACCTGTT AACCAGCAAT AGCGTGTTCT GGGCGGAAGG CGGCGCGAAG
GTGCAACTTA ACGGCAGCGG CCTAACGGTA CAGGCCTCGC CACTCTCCCG CGCGCTGAAA
GGGGCCATTA GTTTTGATAA CCTGAGCGGC GCCAGCGCCA GTCGGCGCAA AGGCGATAAA
CGCATTCTTT ATGCTTCAGA AACTTCCGCC CGCGCGGTAG GCGGACAAAT TACGCTGCAC
GCGTTCGACG CTGGAAAATT GGCGGAAGGG ATGCCCATTC GTTACCTCGG TATTGATATC
GGCCAGATCC AGACGCTGGA ATTGATCACC GCACGTAATG AAGTGCAGGC AAAAGCCGTA
CTTTATCCGG AGTATGTACA GACATTTGCC CGCGCCGGGA CACGTTTTTC CGTTATCACG
CCACAAATTT CCGCGGCGGG CGTCGAGCAT CTGGATACGA TTCTCCAGCC CTATATTAAC
GTTGAGCCAG GACGCGGCGC GGCACGGCGC GACTTTGAAC TGCAGGAAGC CACGATTACC
GACTCACGCT ATCTGGATGG GTTAAGCATC GTCGTGGAGG CGCCAGAAGC AGGCTCGCTT
AATATTGGTA CCCCCGTCCT GTTTCGCGGT ATCGAAGTGG GAACCGTCAC CGGAATGTCC
CTGGGGTCGC TCTCCGATCG CGTGATGATC ACCTTGCGCA TCAGTAAGCG TTACCAATAT
CTGGTGCGTA ATAACTCCGT ATTCTGGCTT GCCTCCGGCT ATAGTCTCGA CTTTGGTCTG
ACAGGCGGCG TGGTGAAAAC GGGGACATTT AATCAGTTCA TCCGTGGCGG TATCGCCTTC
GCTACTCCAC CAGGTACGCC GCTGGCGCCA AAAGCGCAAG CCGGTAAGCA TTTCCTGTTA
CAAGAGAGCG AACCGAAAGA GTGGCGTGAA TGGGGTACCG CTCTGCCACG TTAA
 
Protein sequence
MSQETPASKT EAQIKTKRRI SPFWLLPLIA LMIAGWLVWD SYQDRGNSVT IDFMSADGIV 
PGRTPVRYQG VEVGTVEDVS LSKDLRKIEV RVSIKSDMED ALREETQFWL VTPKASLAGV
SGLDALVGGN YIGMMPGKGK PRDHFVALDT QPKYRLSNGD LMIHLNAPDL GSLNSGSLVY
FRKIPVGRVY DYSINPNKQG VTIDVLIERR FTDLVKKGSR FWNVSGIDAD LSLSGAKVKL
ETLAALVNGA IAFDSPDNSK PAAQDDTFGL YKDLAHSQRG VIVKLELPSG DGLKAESTPL
MYQGLEVGEL SKLTLNPGGK VTGEMTVDPS VVPLMRENTR IELRNPKLSL SDANISSLLT
GKTFELVPGD GEPRSEFVVV PGEKALLHEA NALTLTLTAP ESYGIEPGQP LILHGVKIGQ
VIERNLSSKG VSFTVAIEPQ HRDLVQGDSK FVVNSRVDVK VGLDGVEFLG ASASEWIDGG
IRILPGTSGK MKSTYPLYAN LEKALENSLS DLPTTTLTLT AETLPDVQAG SVVLYRKFEV
GEVITVRPRA NTFDIDLHIK PEYRHLLTSN SVFWAEGGAK VQLNGSGLTV QASPLSRALK
GAISFDNLSG ASASRRKGDK RILYASETSA RAVGGQITLH AFDAGKLAEG MPIRYLGIDI
GQIQTLELIT ARNEVQAKAV LYPEYVQTFA RAGTRFSVIT PQISAAGVEH LDTILQPYIN
VEPGRGAARR DFELQEATIT DSRYLDGLSI VVEAPEAGSL NIGTPVLFRG IEVGTVTGMS
LGSLSDRVMI TLRISKRYQY LVRNNSVFWL ASGYSLDFGL TGGVVKTGTF NQFIRGGIAF
ATPPGTPLAP KAQAGKHFLL QESEPKEWRE WGTALPR