Gene SeD_A1461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1461 
SymbolpphA 
ID6871980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1416365 
End bp1417015 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content52% 
IMG OID642784617 
Productserine/threonine protein phosphatase 1 
Protein accessionYP_002215287 
Protein GI198242070 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.813744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.2036 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGGC CTGAAGAGAT TTATCAGCGA ATAGAGGCAA AGAATTGGCG GCATGTCTGG 
GTGGTTGGCG ATATTCACGG CTGTTTTTCA ATGTTAATGA AAAGGTTACG TGAGTGTCGA 
TTTGATCCGC AACAAGACTT GTTAGTTTCT GTGGGCGATC TCATTGATAG AGGCCCGGAC 
AGCTTGGGTT GCCTGGCTTT ACTGCGTGAG TCCTGGATGA TGGCGGTTCG CGGCAATCAT 
GAACAAATGG CGCTGGATGC GCGGGCCTCA TTGCAGTCGA CGCTGTGGTT GATGAATGGT 
GGCGACTGGT TTACCCGCCT GACCGCTGAA CACGCTGCGC AAGCTGAAGC GCTTTTTATC 
CTTTGTCAGC GGCTGCCCTG GATACTGGAA GTTCGCTGCC GCCATAGCAC GCATGTGATC 
GCTCATGCTG ATTACCCCGC GTCAACCTAT CAATGGCAAA GAAAAGTCGA TTTACATCAG 
GTTCTCTGGA GTCGCGAACG GCTCATAAAT AAGCGCGGCG GGATTAGCGG AGCCGATCAT 
TTTTGGTTTG GCCATACGCC GTTGCGCCGG CGCATGGATT TTGCCAACGT ACACTATATT 
GATACGGGCG CGGTATTTGG CGGGCAATTG ACGTTAGCGC GGATACAATA G
 
Protein sequence
MMRPEEIYQR IEAKNWRHVW VVGDIHGCFS MLMKRLRECR FDPQQDLLVS VGDLIDRGPD 
SLGCLALLRE SWMMAVRGNH EQMALDARAS LQSTLWLMNG GDWFTRLTAE HAAQAEALFI 
LCQRLPWILE VRCRHSTHVI AHADYPASTY QWQRKVDLHQ VLWSRERLIN KRGGISGADH 
FWFGHTPLRR RMDFANVHYI DTGAVFGGQL TLARIQ