Gene SeD_A1432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1432 
Symbol 
ID6872951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1399187 
End bp1400266 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content48% 
IMG OID642784594 
Productintegrase 
Protein accessionYP_002215264 
Protein GI198241749 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00370653 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value0.301971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCGAA AAAAGTACGA TGCTAACCTT CCGAGGTACC TCACCTACCG TAAGGCCAGT 
AAATCTTTTT TCTGGCGTAA CCCGGTAACT GACAAGGAAT TTCCGCTCGG TCAGATCGCC 
CGCAGGGACG CAATCACACA GGCCATAGAG GCAAACAACT TCATAGCGCA AAACCACACG 
CCAGTGGCGC TTATTGAAAA ACTAAAAGGA ACGGACTCAT TCACTGTGTC CGCATGGATT 
GATCGCTATG AGGTTTTATT ACAGCGCCGG AATCTGTCGG TTAATACCTA CAAGATTCGC 
AGTAATCAAT TAGCGACCGT ACGCGAAAAA ATGGGAGAAA TAATACTGGC AGAAGCAACA 
ACCCGGCACA TTGCCAAATT TCTTGAGTCG TGGATAACCG AGGGAAAAAA CACTATGGCG 
GGAGCAATGA GATCAGTTCT ATCTGACATG TTCAGAGAGG CTATTGTCGA AGGGCATATT 
GTGAAAAACC CGGTGGAAGC AACCCGGATA CCAGAGATTA AGGTGGCCAG GGAACGCCTG 
CAACTGGAAA CATATAACGC CACGAGGACG GCGGCAGAAC ATCTGCCTGT GTGGTTTCCT 
CTTGCGATGG ATCTCGCGCT GGTTACTGGT CAACGTAGGG AGGATATCGT AAATATGAAA 
TTTAGTGATG TTGTTGACAA CCGCTTATAC GTAACTCAGA TTAAAACCGG AATGAAAATA 
GCCATTCCCC TATCCCTGAC CCTTGAGGCA CCAGGGTTAC GTCTGGGAAC GGTTATCGAT 
CGCTGCCGGC TGGTAAGCAG AACTGATATC ATGATCAGTG CAGGAATCAG GAAAAATAGC 
CCGACCGGGA ATATTCACCC GGATGGGCTG ACAAAGACAT TTGTAAAAGC AAGAAAAGCC 
TCCGGCGTTA ACTTCAGCAA TAATCCACCG ACATTTCACG AGATCCGAAG TCTGGCCGGA 
CGGCTGTACA AAAACGAGCA CGGCGAGGTG TTCGCCCAAA AACTCCTGGG CCACACATTA 
GCGAACACCA CGAAACTCTA TCTCGATGAG CGTGATGATA AAGCTTATAT GATGCTCTAA
 
Protein sequence
MSRKKYDANL PRYLTYRKAS KSFFWRNPVT DKEFPLGQIA RRDAITQAIE ANNFIAQNHT 
PVALIEKLKG TDSFTVSAWI DRYEVLLQRR NLSVNTYKIR SNQLATVREK MGEIILAEAT 
TRHIAKFLES WITEGKNTMA GAMRSVLSDM FREAIVEGHI VKNPVEATRI PEIKVARERL 
QLETYNATRT AAEHLPVWFP LAMDLALVTG QRREDIVNMK FSDVVDNRLY VTQIKTGMKI 
AIPLSLTLEA PGLRLGTVID RCRLVSRTDI MISAGIRKNS PTGNIHPDGL TKTFVKARKA 
SGVNFSNNPP TFHEIRSLAG RLYKNEHGEV FAQKLLGHTL ANTTKLYLDE RDDKAYMML