Gene SeD_A1429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1429 
Symbol 
ID6874506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1396231 
End bp1396953 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content40% 
IMG OID642784592 
Productguanine nucleotide exchange factor SopE 
Protein accessionYP_002215262 
Protein GI198244542 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.148881 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAAAAA TAACTTTATT TCCCCATAAC TTTAGAATCC AAAAACAGGA AGCCACACCA 
CTAAAAGAAA AATCAACCGA GAAAAATTCT TTAGCAAAAA GTATTCTCGC AGTAAAAAAT 
CACTTCATCA AATTAAATTC AAAATTATCG GAACGTTTTA TTTCGCATAA GAACACTGAA 
TCTTCTGCAA CACACTTTCA CCGAGGAAGC GCATCTGAGG GCCGGGCAGT GTTGACAAAT 
AAAGTCGTTA AAAACTTTAT GCTTCAAACG CTCCATGATA TAGATATTAG AGGTAGCGCG 
AGTAAAGACC CCGCATACGC CAGCCAGACC CGTGAAGCTA TACTATCGGC AGTTTACAGC 
AAGTATAAAG ATCAGTATTG TAACTTGCTC ATCAGCAAAG GAATCGACAT AGCGCCTTTT 
CTTAAGGAAA TTGGCGAGGC TGCGCAAAAT GCAGGTCTGC CCGGAGCAAC CAAGAATGAC 
GTTTTTACGC CAAGCGGCGC AGGAGCCAAT CCTTTTATAA CTCCGTTGAT TACATCAGCA 
TACAGTAAGT ATCCACATAT GTTTACCAGT CAACATCAGA AGGCATCCTT TAACATCTAT 
GCGGAGAAGA TCATTATGAC AGAAGTTGTA CCGCTGTTTA ATGAGTGTGC TATGCCGACT 
CCACAGCAAT TCCAACAAAT ACTAGAAAAC ATTGCTAATA AATATATCCA AAACACTCCC 
TGA
 
Protein sequence
MTKITLFPHN FRIQKQEATP LKEKSTEKNS LAKSILAVKN HFIKLNSKLS ERFISHKNTE 
SSATHFHRGS ASEGRAVLTN KVVKNFMLQT LHDIDIRGSA SKDPAYASQT REAILSAVYS 
KYKDQYCNLL ISKGIDIAPF LKEIGEAAQN AGLPGATKND VFTPSGAGAN PFITPLITSA 
YSKYPHMFTS QHQKASFNIY AEKIIMTEVV PLFNECAMPT PQQFQQILEN IANKYIQNTP