| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1420 |
|---|
| Symbol | |
|---|
| ID | 6874691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 1387240 |
|---|
| End bp | 1387935 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642784586 |
|---|
| Product | phage minor tail protein L |
|---|
| Protein accession | YP_002215256 |
|---|
| Protein GI | 198245742 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4672] Phage-related protein |
|---|
| TIGRFAM ID | [TIGR01600] lambda-like phage minor tail protein L |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 0.0336216 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGATA TACCACAGGA AACCTTGAGC GAGACCACCA AAGCGGAGCA GTCCGCGAAG
GTGGATTTGT GGGAATTTGA TTTAACCGCG ATTGGCGGTG AGCGCTTTTT CTTCTGTAAC
GAACCGAACG AAAAAGGCGA GCCGTTAACC TGGCAGGGGA GGCAGTACGA ACCGTACCCG
ATACAGGTAC AGGATTTTGA GATGAACGGG AAAGGCGCAT CTCCCCGCCC GAACCTCGTT
GTTGCCAATC TCTTTGGTCT GGTCACGGGG ATGGCGGAGG ATTTGCAAAG TCTCGTCGGC
GCGTCAGTGG TAAGGCATCA GGTTTACAGC AAGTTTCTTG ATGCGGTGAA TTTCAGTAAC
GGCAATCCGG GCGCTGACCC GGAGCAGGAG GCGGTAGCGC GCTATAACGT GGAGCAGTTG
TCAGAACTGG ATTCATCAAC TGCTACCATT ATTCTGGCAT CACCGGCAGA AACCGACGGT
TCTGTGGTGC CGGGGCGTAC CATGCTGGCG GACTCCTGTC CGTGGGATTA CCGGGATGAA
AACTGCGGAT ACGACGGCCC GCCCGTGGCC GATGAGTTCG ATAAGCCCAC CTCAGACCCG
AAAAAGGATA AATGCAGCCA CTGCATGAAA GGCTGTGAAA TGCGTAACAA TCTGGTGAAT
GCCGGATTTT TCGCTTCCAT CAACAAACTG TCTTAA
|
|---|
| Protein sequence | MQDIPQETLS ETTKAEQSAK VDLWEFDLTA IGGERFFFCN EPNEKGEPLT WQGRQYEPYP
IQVQDFEMNG KGASPRPNLV VANLFGLVTG MAEDLQSLVG ASVVRHQVYS KFLDAVNFSN
GNPGADPEQE AVARYNVEQL SELDSSTATI ILASPAETDG SVVPGRTMLA DSCPWDYRDE
NCGYDGPPVA DEFDKPTSDP KKDKCSHCMK GCEMRNNLVN AGFFASINKL S
|
|---|
| |