Gene SeD_A1404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1404 
Symbol 
ID6874921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1372946 
End bp1373479 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content51% 
IMG OID642784570 
Productgifsy-2 prophage protein 
Protein accessionYP_002215240 
Protein GI198245983 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0000000325314 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGATCAGG AAATTAAAAG CCTCGAATTA AACATCACAC AGCTTTCGGC CATCACTGGT 
GCACACCGAC AGACCATCGC CAGCAGGCTG AAGGGCGTAA AAACCTCAGG TGGGAACGGT 
AGTAACCTGA AAATCTACCG GCTGGTGGAT ATTCTGACCG CCATGATGAC GATGCCGGCT 
GTTACCGGGG AGAATGACCC CAATAAGATG AAACCCTCAG ATCGACGGGC ATGGTTTCAG 
TCGGAAATGA CGCGTATTGA GCTGGAAAAG GAGATGAGAA CTCTGATCCC GGCCAGCGAG 
GTGCTGAGCG TTTATGCTGT CATGGCAAAA ACGGTCGTCA AGACACTGGA GATACTGCCG 
GACTTACTGG AAAGGGATGC GGCATTGCCG CCTGATGCGC TGGAAATGAC GCAAAAAATT 
ATTGATCAAC TCAGGGAAGA TCTGGCCAGC ATGACATACC AGGCCTGCGC GGATGCTATA 
AACGGAGATG ATGATGACAA CGGTGACGAA GGGCAAGAGG AAGAGCAGGA ATAG
 
Protein sequence
MDQEIKSLEL NITQLSAITG AHRQTIASRL KGVKTSGGNG SNLKIYRLVD ILTAMMTMPA 
VTGENDPNKM KPSDRRAWFQ SEMTRIELEK EMRTLIPASE VLSVYAVMAK TVVKTLEILP 
DLLERDAALP PDALEMTQKI IDQLREDLAS MTYQACADAI NGDDDDNGDE GQEEEQE