| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1391 |
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| Symbol | |
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| ID | 6873699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1362602 |
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| End bp | 1363663 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642784557 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002215227 |
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| Protein GI | 198241964 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.723857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000000000000157902 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTCACGC AAGCGCTACG TGTAAGTATT CCGTGGTTCA CATTTGTGAA TATCAGTTTT
GCGCTTATCA TTTTATTTCG CCACATACTC ATCAGTGACT TTGACAAGTC GATCAGTGCA
CAGACTGGAA TACTGCCTTT AATAGACGAT ATTATGGGCA GTATTATTGT TTTTTCGTTC
CTGATACTCC TTTTCATTTA CCGCCTTCCG GCCAGATTTA CTCCTCTTTG TCTGGTGATG
CTGCTGATTC TCAGTCTGAT GTGGAGCTAT TGTAGCTACT TTTTTATTGT CTGGTGGCAA
CTGCCTTTTG CCTGGCCTCT CAGTGTCATC CTTATGCTTA CCGCGCTGGC TGCGCTTTAT
TATCATCTGC CAGCGTTGCT ATTTTTCATC GTCCCGTTAT GGCTGACCGC CCTGCTGGCC
AGTGTGCAGC TTAATCAGTA TGTGAATATC CGGTTTTTAT TAGTCTGGCT TACTCTTACC
ACCATACTCA TTTATGGTCG CTTTATCCTG CAGCGCTGGT TTGATGAAGC CTGGTTGCGT
TACCAGGAAA ACCGGATGCT TATCGCGCGT CTCGACGTTA TGGCTCACCA GGATGCACTG
ACCGGGACCG CTAATCGACG TTCAATGGAA AGTTTTCTTG GGGATGCTCT CCGCCAGACG
GAGCCGTTTG CACTGATCAT GCTCGATGTG GACTATTTCA AAAACTATAA CGACCATTAT
GGTCACCAGG CTGGCGATGC CTGTCTGGCA AAGGTGGCCG GGGTAATGAA GAGGTCGGTT
CGTACTCCGG CAGACCTGGT GGCACGTTAC GGGGGCGAGG AGTTTGTCGT TGTGCTGCCT
TCGTCGTCGC TGAATGAAGC TGCACTGGTT GCTGAACGTA TTCAGACAAA CCTGCGTGAA
ACCGCAATGC CGCATGCAGC ATCTGCGGTT AGCGAAACGG TCACCGTCAG TATGGGCATC
ACCCTTTCCA CAGCCGGTGA CACTGTTACC GGCATTATTG CCAGAGCGGA CGAGGCCCTT
TATCGGGCTA AACAACAGGG ACGTAATCGT TGGGTAAAGT AA
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| Protein sequence | MVTQALRVSI PWFTFVNISF ALIILFRHIL ISDFDKSISA QTGILPLIDD IMGSIIVFSF
LILLFIYRLP ARFTPLCLVM LLILSLMWSY CSYFFIVWWQ LPFAWPLSVI LMLTALAALY
YHLPALLFFI VPLWLTALLA SVQLNQYVNI RFLLVWLTLT TILIYGRFIL QRWFDEAWLR
YQENRMLIAR LDVMAHQDAL TGTANRRSME SFLGDALRQT EPFALIMLDV DYFKNYNDHY
GHQAGDACLA KVAGVMKRSV RTPADLVARY GGEEFVVVLP SSSLNEAALV AERIQTNLRE
TAMPHAASAV SETVTVSMGI TLSTAGDTVT GIIARADEAL YRAKQQGRNR WVK
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