Gene SeD_A1383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1383 
Symbol 
ID6873845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1354431 
End bp1357121 
Gene Length2691 bp 
Protein Length896 aa 
Translation table11 
GC content50% 
IMG OID642784549 
Productexonuclease VIII 
Protein accessionYP_002215219 
Protein GI198242345 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00000000000000167765 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCATTA AGCAGGAAGA ATATTCATTT TATTACAAGG TTAAAAATGA AAGTGCCAGG 
AAACGCCTCG GCTTTAAAGC CGGTTTTTTC TGGTATACAG CTAAAAAGCA GTCACTCGCC
CTCTCCCGTG GCGAACTGGC TATGGATGCT GCCGGATTTG ATGAAGCTGA TTTTGCCAGA
CCTGTACGCG TACATTTTCC GGTAGAAAAT GACATTCCGC CCGAGGGGGC CTTTGATACT
AAATTTTGTG AAAACCGCGA ACCCGGTGGC GAAGACGGCA AAACCCTGAC ACTTATCCCC
GGCGCAGCTT CTGCTGTTAA ATCAGATGAA ACAGAACGCG CCGACGGTGC TGGCACTCCT
GCCGGAGAAA ACGGGATACA GGAATCTCAT AACCCGCCAG CAAACCCTCA ACTGACCGTG
GTTGCGACAC TGCCGTTCCG CCATCGCGTT CTGGCACAGT ATATTGGCGA TGGAGAATAT
CTTTATCACG TCGATACAGA CCAGAAAAAA GAAATCGCGT GTCTGGAGAT GGATACTCAG
AATACCACTG TCCAGAACCT GATACTCGCA GCAGAAAATG TAGAGCCGTT CAAAAAAGCT
ATCGAGCACG ATATTCACAA AGCAGTGAAT GCGTATAAAC AGGTATTTCC TGTCGATGGA
AAAGTGCCTG AGTTATGCAC CACTATTAAG TTTTTTAAGG AATGGTTCAG TGCTGAACAC
ATTAACCGCG GCCTGCTGAT TAAGGAATGG GCTGAACGCC TGAAGAATAA ACCTGCACCC
GTTAAAAAAA CCGGGCCACA TAAAATAATT GTCGACGACG TAAATAAGCC AGAACGTCCA
CGCCGTAGCG AAAAACCGAC ACACAGAACG ATTAACTATG AGCTCGCCTG TGGTTTCTGT
GAGGAGCTGG ATCTGAATAA CCTGCGTCCT GCAATGGATT TTGCAAAACT TATCATCGCC
GAAGACCGGG AAGACTGGAA ACAAATGTCG ATGACAGTGG GCATTATTCC CGACATCAAA
GGCTACGACC GACAGACCAT TATTGACCTG GTACGCAAAG CGCCAAAGGC CGTACATAAC
GGTAATCCTG ATCTTCGCCG GACGTGGTGC GAAAGCTTTC TTGCCGTTCA TGGTGTTCGC
GATCCGGACT GGTACGAATA TGTGCCTGAT AACACCCCAA CAACCCATGA AGAAAATGCA
GCAAGGCTTC GTCAGGCGGG CAAATGTCTG CGGGATATTG AGACAGGGAG ATTTCAGTGT
GATGAAGAAA AACCGCAACC GACAGGCGAA CTGGCAGATG AACCAGCAAC GCCTGAAGCA
GTGGAACAGG ACACAACTGA ACATCATCCG GACCCGCAGC CGCTGGAGAA TGAGCCACCT
GTAAGCCAGA CAGAAGCAGG CTACCAGAAA ATACGGGCAG AACTGCACGA AGCACGTAAA
AACATTCCAC CCAAAAACCC GGTTGATGTT GGTAAACAAC TGGCAGCCGC GCGCGGTGAA
TATGTCGAAG GCATCAGCGC CCCGAACGAT CCGAAGTGGG TTCATAACAA TTACAGCGCC
TCAAATCAGG GTGAAAAAGA AGAAGTGGTG CCGGAGGAAA AACAACCAGC AGCAGAGCCG
GAGGCTGTCA CCAGAAACGC AGACGGGACT TTCGACGTTT CAGCGCTGTT CAGTGCTCCC
TCAAATCAGA CCGAAAAAAT GGAAGCCAGA ACAGAAAGAG ATGGAGAAAC GCCGAAAGAG
AGCAACCAGC AGGAAACGGC TGGCGATACA GGGCAGGAAA TTACAACGGA CGGTGGATCA
GGTACTGGCG GTGATGAAGC TGGCGAAGCG GCAGATCCCG TAGAAAACGG AAATTTCACT
GTCCCTGATG ATATACAGCC AGGTATTTAC TATGACATCC CTAACGAGGC GTATCACGCT
GGCCCCGGCG TCAGTAAATC ACAGCTTGAC GATATCGCAG ACACACCAGC AATTTATCTG
TGGCGTAAAA ATGCCCCCGT GGACACGGAG AAAACAAAGA CTCTCGATAC AGGAACGGCT
TTTCACTGCC GGATACTGGA ACCAGAGGAG TTCAGTAAAC GCTTCATCAT CGCACCGGAG
TTTAACCGCC GTACCAGCGC AGGAAAAGAA GAAGAGAAAA CCTTTCTGGA AGAGTGCGCC
CGGACAGGAA GAACCGTGCT TACGGCAGAA GAAGGCCGGA AAATCGAACT TATGTACCAG
AGTGTGATGG CGTTACCGCT GGGGCAGTGG CTGGTTGAAA GCGCCGGATA TGCTGAATCA
TCAGTCTACT GGGAAGATCC GGAAACAGGA ATTTTGTGTC GGTGCCGTCC GGACAAAATC
ATCCCTGAAT TTCACTGGAT CATGGATGTG AAAACCACTG CTGATATCCA GCGGTTCAGG
ACAGCTTATT ACGATTATCG CTACCACGTA CAGGACGCTT TCTACAGCGA CGGTTATCGG
GCGCAGTTCG GTGAGATACC CACCTTCGTC TTCCTTGTTG CCAGTACAAC CGCCGAATGT
GGGCGTTACC CGGTTGAGAT TTTCATGATG GGTGAAGACG CAAAACTGGC AGGTCAGCGG
GAATATCGTC GCAATCTGCA AACCCTGGCC GAATGCCTTA GTAACGATGA ATGGCCTGCC
ATTAAAACTT TATCACTGCC CCGCTGGGCG AAGGAGAATG CAAATGCCTA A
 
Protein sequence
MSIKQEEYSF YYKVKNESAR KRLGFKAGFF WYTAKKQSLA LSRGELAMDA AGFDEADFAR 
PVRVHFPVEN DIPPEGAFDT KFCENREPGG EDGKTLTLIP GAASAVKSDE TERADGAGTP
AGENGIQESH NPPANPQLTV VATLPFRHRV LAQYIGDGEY LYHVDTDQKK EIACLEMDTQ
NTTVQNLILA AENVEPFKKA IEHDIHKAVN AYKQVFPVDG KVPELCTTIK FFKEWFSAEH
INRGLLIKEW AERLKNKPAP VKKTGPHKII VDDVNKPERP RRSEKPTHRT INYELACGFC
EELDLNNLRP AMDFAKLIIA EDREDWKQMS MTVGIIPDIK GYDRQTIIDL VRKAPKAVHN
GNPDLRRTWC ESFLAVHGVR DPDWYEYVPD NTPTTHEENA ARLRQAGKCL RDIETGRFQC
DEEKPQPTGE LADEPATPEA VEQDTTEHHP DPQPLENEPP VSQTEAGYQK IRAELHEARK
NIPPKNPVDV GKQLAAARGE YVEGISAPND PKWVHNNYSA SNQGEKEEVV PEEKQPAAEP
EAVTRNADGT FDVSALFSAP SNQTEKMEAR TERDGETPKE SNQQETAGDT GQEITTDGGS
GTGGDEAGEA ADPVENGNFT VPDDIQPGIY YDIPNEAYHA GPGVSKSQLD DIADTPAIYL
WRKNAPVDTE KTKTLDTGTA FHCRILEPEE FSKRFIIAPE FNRRTSAGKE EEKTFLEECA
RTGRTVLTAE EGRKIELMYQ SVMALPLGQW LVESAGYAES SVYWEDPETG ILCRCRPDKI
IPEFHWIMDV KTTADIQRFR TAYYDYRYHV QDAFYSDGYR AQFGEIPTFV FLVASTTAEC
GRYPVEIFMM GEDAKLAGQR EYRRNLQTLA ECLSNDEWPA IKTLSLPRWA KENANA