Gene SeD_A1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1379 
Symbol 
ID6875795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1351456 
End bp1352535 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content48% 
IMG OID642784545 
Productphage integrase 
Protein accessionYP_002215215 
Protein GI198244121 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0000000000000565692 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGTCGAA AAAAGTACGA TGCTAACCTT CCGAGGAACC TCACCTACCG TAAGGCCAGT 
AAATCTTTTT TCTGGCGTAA CCCGCTAACT GACAAGGAAT TTCCGCTCGG TCAGATCGCC 
CGCAGGGACG CTATCACACA GGCCATAGAG GCAAACAACT TCATAGCGCA AAACCACACA 
CCAGTGGCGC TTATTGAAAA GCTAAAAGGA ACGGACTCAT TCACTGTGTC CGCATGGATT 
GATCGCTATG AGGTTTTATT ACAGCGCCGG AGTCTGTCGG TTAATACCTA CAAGATTCGC 
AGTAATCAAT TAGCGACCGT ACGCGAAAAA ATGGGGGAAA TAATACTGGC AGAAGTAACA 
ACCAGGCACA TTGCCAAGTT TCTTGAGTCG TGGATAACCG AGGGAAAAAA CACTATGGCG 
GGAGCAATGA GATCAGTTCT ATCTGACATG TTCAGAGAGG CTATTGTCGA AGGGCATATT 
GTGAAAAACC CGGTGGAAGC AACCCGGATA CCAGAGATTA AGGTGGCCAG GGAACGCCTG 
CAACTGGAAA CGTATAACGC CACACGAGCG GCAGCAGAGC ATATGCCTGC ATGGTTCCCT 
CTCGCGATGG ATTTAGCGCT CGTTACTGGT CAACGTAGGG AGGATATCGT AAATATGAAA 
TTTAGTGATG TTGTTGACAA CCGCTTATAC GTAACTCAGA TTAAAACCGG AATGAAAATA 
GCCATTCCCC TATCCCTGAC CCTTGAGGCA CCAGGGTTAC GTCTGGGAAC GGTTATCGAT 
CGCTGCCGGC TGGTAAGCAG AACTGATATC ATGATCAGTG CAGGAATCAG GAAAAATAGC 
CCGACCGGGA ATATTCACCC GGATGGGCTG ACAAAGACAT TTGTAAAAGC AAGAAAAGCC 
TCCGGCGTTA ACTTCAGCAA TAATCCACCG ACATTTCACG AGATCCGAAG TCTGGCCGGA 
CGGCTGTACA AAAACGAGCA CGGCGAGGTG TTCGCCCAAA AACTCCTGGG CCACACATTA 
GCGAACACCA CGAAACTCTA TCTCGATGAG CGTGATGATA AAGCTTATAT GATGCTCTAA
 
Protein sequence
MSRKKYDANL PRNLTYRKAS KSFFWRNPLT DKEFPLGQIA RRDAITQAIE ANNFIAQNHT 
PVALIEKLKG TDSFTVSAWI DRYEVLLQRR SLSVNTYKIR SNQLATVREK MGEIILAEVT 
TRHIAKFLES WITEGKNTMA GAMRSVLSDM FREAIVEGHI VKNPVEATRI PEIKVARERL 
QLETYNATRA AAEHMPAWFP LAMDLALVTG QRREDIVNMK FSDVVDNRLY VTQIKTGMKI 
AIPLSLTLEA PGLRLGTVID RCRLVSRTDI MISAGIRKNS PTGNIHPDGL TKTFVKARKA 
SGVNFSNNPP TFHEIRSLAG RLYKNEHGEV FAQKLLGHTL ANTTKLYLDE RDDKAYMML