Gene SeD_A1375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1375 
Symbol 
ID6873255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1349828 
End bp1350703 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content53% 
IMG OID642784543 
Productcopper resistance protein D 
Protein accessionYP_002215213 
Protein GI198245313 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1276] Putative copper export protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0000000000101149 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGCTGA CATTCGTCTG GATAACTCTC CGATTTATTC ATTTTGCTAG TGTGATGCTG 
GTCTACGGCT GCGCGCTTTA CGGTGCCTGG CTGGCACCCG CATCAATTCG TCGTTTAATG 
ACGCGTCGAT TTTTACATCT GCAACAACAT GCCGCCGCCT GGAGCGTTAT CAGCGCGGCT 
TTCATGCTGG CGGTTCAGGG CGGACTGATG GGCGGCGGCT GGCCCGATGT TTTTTCCGTC 
TCGGTGTGGG GCGCGGTACT GCAAACCCGC TTTGGCGCGG TCTGGATATG GCAAATTATC 
CTCGCGCTGG TCACGCTGGC GGTGGTAGTC ATTGCGCCGG TAAAAATGCA ACGACGGCTT 
CTTATTCTAA CCGTTGCTCA GTTTATCCTG CTGGCAGGCG TTGGACATGC GACGATGCGC 
GACGGTGCAG CGGGAACATT ACAGCAGATT AACCATGCTC TGCATTTACT CTGTGCCGCA 
GCCTGGTTTG GCGGGCTGTT GCCAGTGGTT TATTGTATGC GCATGGCTCA GGGACGCTGG 
CGTCAACATG CTATTAGCGC CATGATGCGT TTTTCTCGTT ATGGTCACTT TTTTGTGGCG 
GGCGTATTGC TCACAGGCAT TGGCAACACG CTATTTATCA CGGGATTTAC CGCTATCTGG 
CAGACCACCT ATGGACAGTT GCTTTTGTTA AAATGTGCGC TGGTCGTGCT TATGGTAGCA 
ATTGCGCTGA CGAATCGGTA TGTTCTCGTA CCACGTATGC GACAGGAAAA TCCCCGGACT 
GACCTATGGT TTGTCAGGAT GACGCAAATT GAATGGGGAG TTGGAGGCAT AGTTCTGGCG 
ATCGTCAGCC TGTTTGCAAC CCTCGAACCT TTTTGA
 
Protein sequence
MMLTFVWITL RFIHFASVML VYGCALYGAW LAPASIRRLM TRRFLHLQQH AAAWSVISAA 
FMLAVQGGLM GGGWPDVFSV SVWGAVLQTR FGAVWIWQII LALVTLAVVV IAPVKMQRRL 
LILTVAQFIL LAGVGHATMR DGAAGTLQQI NHALHLLCAA AWFGGLLPVV YCMRMAQGRW 
RQHAISAMMR FSRYGHFFVA GVLLTGIGNT LFITGFTAIW QTTYGQLLLL KCALVVLMVA 
IALTNRYVLV PRMRQENPRT DLWFVRMTQI EWGVGGIVLA IVSLFATLEP F