Gene SeD_A1355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1355 
SymbolznuB 
ID6871328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1330392 
End bp1331177 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content55% 
IMG OID642784523 
Producthigh-affinity zinc transporter membrane component 
Protein accessionYP_002215193 
Protein GI198245595 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.637528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.00410518 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTGAAT TATTACTGCC CGGCTGGCTG GCCGGGATGA TGCTGGCCTG CGCCGCTGGT 
CCTTTGGGCT CATTTGTGGT CTGGCGTCGG ATGTCCTATT TTGGCGATAC GCTGGCTCAC
GCGTCGCTTC TGGGCGTGGC GTTTGGCCTG TTGCTGGACG TTAATCCCTT TTATGCGGTA
ATCGCCGTTA CGCTGCTGCT GGCCGCCGGT CTGGTATGGC TGGAGAAACG CCCTCACCTC
GCGATTGATA CCTTACTGGG CATTATGGCG CACAGCGCCT TATCTTTAGG ACTGGTCGTG
GTCAGCCTGA TGTCCAACGT CCGCGTTGAT TTAATGGCTT ATCTGTTTGG CGATTTGCTG
GCCGTCACGC CGGAAGATCT TATCTCGATC GCTATTGGGG TCGTTATTGT GCTGGCCATT
CTCTTCTGGC AGTGGCGCAA CTTGCTGTCA ATGACTATCA GTCCGGATCT TGCCTTTGTC
GATGGCGTGA AGTTACAGCG CGTGAAGCTG CTATTGATGC TGGTAACAGC GTTAACTATT
GGCGTGGCGA TGAAGTTTGT CGGAGCGCTG ATCATTACGT CGCTGCTGAT TATCCCCGCC
GCAACCGCGC GTCGCTTTGC CCGTACGCCG GAGCAGATGG CGGGCATCGC CGTTGGTGTA
GGTATGATAG CGGTTACAGG TGGACTGACC TTCTCAGCCT TTTATGATAC CCCGGCAGGG
CCATCCGTAG TGCTGTGTGC CGCGCTGCTG TTTATCTTCA GTATGATGAA AAAGCAGGCA
AGCTAA
 
Protein sequence
MIELLLPGWL AGMMLACAAG PLGSFVVWRR MSYFGDTLAH ASLLGVAFGL LLDVNPFYAV 
IAVTLLLAAG LVWLEKRPHL AIDTLLGIMA HSALSLGLVV VSLMSNVRVD LMAYLFGDLL
AVTPEDLISI AIGVVIVLAI LFWQWRNLLS MTISPDLAFV DGVKLQRVKL LLMLVTALTI
GVAMKFVGAL IITSLLIIPA ATARRFARTP EQMAGIAVGV GMIAVTGGLT FSAFYDTPAG
PSVVLCAALL FIFSMMKKQA S