Gene SeD_A1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1342 
Symbol 
ID6873717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1318606 
End bp1319349 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content53% 
IMG OID642784510 
Productputative methyltransferase 
Protein accessionYP_002215180 
Protein GI198244871 
COG category[R] General function prediction only 
COG ID[COG4106] Trans-aconitate methyltransferase 
TIGRFAM ID[TIGR00740] methyltransferase, putative 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.699592 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.000757661 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTCACC GCGACACGCT TTTTTCTGCG CCTATCGCCC GTCTCGGCGA CTGGACTTTT 
GATGAACGAG TAGCCGAAGT TTTCCCCGAC ATGATTCAGC GTTCGGTACC AGGTTACTCC
AACATCATCT CCATGATCGG CATGTTAGCT GAACGCTTTG TGCAGCCGAA CACGCAGGTC
TACGATCTGG GCTGCTCGCT GGGCGCCGCG ACGCTGTCTG TTCGGCGTAA TATCCGCCAT
GAGCATTGTC GCATTATCGC CGTCGATAAC TCCCCGGCCA TGATTGAACG CTGCCGCCGT
CATATTGATG CGTATAAAGC GCCTACGCCG GTTGAAGTCG TTGAAGGCGA TATCCGCGAT
ATCACTATTG AAAACGCCTC GATGGTGGTG CTGAATTTTA CCCTGCAATT CCTTGAACCT
GCCGAACGCC AGGCATTGCT GGATAAGATT TACCTGGGGT TGAATCCCGG CGGCGCGCTG
GTACTGTCGG AAAAATTTAG CTTTGAAGAC GCGAAAGTGG GCGAGCTGTT ATTCAACATG
CACCACGATT TTAAACGCGC TAATGGGTAC AGCGAACTGG AGATCAGCCA GAAGCGCAGT
ATGCTGGAAA ACGTGATGCT CACCGACTCG GTGGAAACAC ATAAAGCGCG CCTGCGTCAG
GCGGGTTTCG AACACAGTGA ACTGTGGTTC CAGTGCTTTA ATTTCGGGTC GCTTGTCGCG
TTAAAAGCCG GAGTTGCCGC ATGA
 
Protein sequence
MSHRDTLFSA PIARLGDWTF DERVAEVFPD MIQRSVPGYS NIISMIGMLA ERFVQPNTQV 
YDLGCSLGAA TLSVRRNIRH EHCRIIAVDN SPAMIERCRR HIDAYKAPTP VEVVEGDIRD
ITIENASMVV LNFTLQFLEP AERQALLDKI YLGLNPGGAL VLSEKFSFED AKVGELLFNM
HHDFKRANGY SELEISQKRS MLENVMLTDS VETHKARLRQ AGFEHSELWF QCFNFGSLVA
LKAGVAA