Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A1342 |
Symbol | |
ID | 6873717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 1318606 |
End bp | 1319349 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642784510 |
Product | putative methyltransferase |
Protein accession | YP_002215180 |
Protein GI | 198244871 |
COG category | [R] General function prediction only |
COG ID | [COG4106] Trans-aconitate methyltransferase |
TIGRFAM ID | [TIGR00740] methyltransferase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.699592 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.000757661 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTCACC GCGACACGCT TTTTTCTGCG CCTATCGCCC GTCTCGGCGA CTGGACTTTT GATGAACGAG TAGCCGAAGT TTTCCCCGAC ATGATTCAGC GTTCGGTACC AGGTTACTCC AACATCATCT CCATGATCGG CATGTTAGCT GAACGCTTTG TGCAGCCGAA CACGCAGGTC TACGATCTGG GCTGCTCGCT GGGCGCCGCG ACGCTGTCTG TTCGGCGTAA TATCCGCCAT GAGCATTGTC GCATTATCGC CGTCGATAAC TCCCCGGCCA TGATTGAACG CTGCCGCCGT CATATTGATG CGTATAAAGC GCCTACGCCG GTTGAAGTCG TTGAAGGCGA TATCCGCGAT ATCACTATTG AAAACGCCTC GATGGTGGTG CTGAATTTTA CCCTGCAATT CCTTGAACCT GCCGAACGCC AGGCATTGCT GGATAAGATT TACCTGGGGT TGAATCCCGG CGGCGCGCTG GTACTGTCGG AAAAATTTAG CTTTGAAGAC GCGAAAGTGG GCGAGCTGTT ATTCAACATG CACCACGATT TTAAACGCGC TAATGGGTAC AGCGAACTGG AGATCAGCCA GAAGCGCAGT ATGCTGGAAA ACGTGATGCT CACCGACTCG GTGGAAACAC ATAAAGCGCG CCTGCGTCAG GCGGGTTTCG AACACAGTGA ACTGTGGTTC CAGTGCTTTA ATTTCGGGTC GCTTGTCGCG TTAAAAGCCG GAGTTGCCGC ATGA
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Protein sequence | MSHRDTLFSA PIARLGDWTF DERVAEVFPD MIQRSVPGYS NIISMIGMLA ERFVQPNTQV YDLGCSLGAA TLSVRRNIRH EHCRIIAVDN SPAMIERCRR HIDAYKAPTP VEVVEGDIRD ITIENASMVV LNFTLQFLEP AERQALLDKI YLGLNPGGAL VLSEKFSFED AKVGELLFNM HHDFKRANGY SELEISQKRS MLENVMLTDS VETHKARLRQ AGFEHSELWF QCFNFGSLVA LKAGVAA
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