Gene SeD_A1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1341 
Symbol 
ID6873692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1317638 
End bp1318609 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content55% 
IMG OID642784509 
Productputative methyltransferase 
Protein accessionYP_002215179 
Protein GI198244340 
COG category 
COG ID 
TIGRFAM ID[TIGR00452] methyltransferase, putative 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.321568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.00030781 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCGAGT TTGGTAACTT TTATCAGCTC ATTGCTAAAA ATCATCTCTC CCACTGGCTG 
GAAACATTGC CCGCGCAGAT TGCCGCCTGG CAACGCGAGC AGCAGCATGG CTTGTTTAAA 
CAGTGGTCGA ACGCGGTAGA ATTTTTACCG GAAATTACGC CCTGGCGGCT GGATTTACTG 
CACAGTGTCA CGGCGGAAAG CGAAACGCCG CTCAGCGAAG GTCAGCTAAA GCGTATTGAT 
ACATTGCTGC GTAATCTGAT GCCGTGGCGT AAAGGCCCGT TCTCGCTTTA TGGCGTAGAT 
ATTGATACCG AATGGCGCTC AGACTGGAAG TGGGATCGCG TACTGCCGCA TCTGTCAGAT 
TTAACCGGCC GGACGATCCT TGATGTCGGC TGCGGCAGCG GCTATCACCT GTGGCGGATG 
ATTGGCGCGG GCGCACATCT GGCGGTCGGC ATCGATCCTA CACAGCTTTT CCTCTGCCAG 
TTTGAGGCGG TGCGTAAACT GTTGGGTAAC GATCAGCGCG CGCATCTGCT GCCGTTGGGC 
ATTGAACAAC TCCCGGCGCT GAAAGCATTT GATACCGTCT TCTCGATGGG GGTGCTTTAT 
CACCGTCGCT CGCCGCTGGA ACATCTGTGG CAGTTAAAAG ATCAGTTGGT CAACGAGGGT 
GAGCTGGTAC TGGAAACGCT GGTCGTCGAC GGCGACGAAA ATACCGTACT GGTGCCGGGT 
GACCGCTACG CGCAGATGCG TAACGTCTAT TTTATTCCTT CCGCGCCGGC ATTAAAAAAA 
TGGCTGGAAA AATGCGGCTT TATTGACGTG CGTATCGCCG ATGTCTGCGT CACTACCACC 
GAAGAGCAGC GCCGTACCGA ATGGATGGTT ACCGAGTCGC TAGCCGACTT TCTTGACCCG 
AACGATCGCA GCAAGACGGT GGAAGGCTAT CCCGCCCCGC AGCGCGCGGT GCTGATTGCG 
CGTAAACCGT GA
 
Protein sequence
MIEFGNFYQL IAKNHLSHWL ETLPAQIAAW QREQQHGLFK QWSNAVEFLP EITPWRLDLL 
HSVTAESETP LSEGQLKRID TLLRNLMPWR KGPFSLYGVD IDTEWRSDWK WDRVLPHLSD 
LTGRTILDVG CGSGYHLWRM IGAGAHLAVG IDPTQLFLCQ FEAVRKLLGN DQRAHLLPLG 
IEQLPALKAF DTVFSMGVLY HRRSPLEHLW QLKDQLVNEG ELVLETLVVD GDENTVLVPG 
DRYAQMRNVY FIPSAPALKK WLEKCGFIDV RIADVCVTTT EEQRRTEWMV TESLADFLDP 
NDRSKTVEGY PAPQRAVLIA RKP