Gene SeD_A1330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1330 
Symbol 
ID6872055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1306156 
End bp1306800 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content58% 
IMG OID642784498 
Productchemotaxis regulator CheZ 
Protein accessionYP_002215168 
Protein GI198242295 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG3143] Chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0000000000240713 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGCAAC CATCTATCAA GCCTGCTGAT GAAGGCTCAG CAGGAGACAT CATTGCGCGC 
ATCGGTAGTC TGACCCGAAT GCTGCGCGAC AGCCTGCGTG AACTGGGGCT GGACCAGGCG 
ATTGCCGAAG CGGCGGAGGC GATCCCTGAT GCGCGCGACC GTCTGGATTA CGTCGTCCAG 
ATGACGGCGC AGGCGGCGGA ACGCGCGCTA AACAGTGTCG AAGCCTCGCA GCCGCATCAG 
GATGCGATGG AAAAAGAGGC GAAAGCGCTA ACCCAACGTT GGGACGAGTG GTTTGACAAT 
CCGATCGAGC TTGCCGACGC CCGTGAACTG GTGACGGATA CGCGCCAGTT TCTCAGGGAT 
GTCCCGGGCC ATACTAGTTT TACTAACGCG CAACTGCTGG ACATCATGAT GGCGCAGGAT 
TTCCAGGATC TGACGGGTCA GGTGATCAAA CGCATGATGG ACGTGATTCA GGAGATTGAG 
CGCCAGTTGT TAATGGTGCT GCTGGAAAAC ATCCCGGAAC AGAGCGCGCG ACCAAAACGC 
GAGAACGAAA GCTTGCTCAA CGGCCCGCAG GTGGATACCT CGAAAGCTGG CGTCGTCGCC 
AGTCAGGATC AGGTGGACGA CCTGCTGGAC AGTCTTGGCT TTTAA
 
Protein sequence
MMQPSIKPAD EGSAGDIIAR IGSLTRMLRD SLRELGLDQA IAEAAEAIPD ARDRLDYVVQ 
MTAQAAERAL NSVEASQPHQ DAMEKEAKAL TQRWDEWFDN PIELADAREL VTDTRQFLRD 
VPGHTSFTNA QLLDIMMAQD FQDLTGQVIK RMMDVIQEIE RQLLMVLLEN IPEQSARPKR 
ENESLLNGPQ VDTSKAGVVA SQDQVDDLLD SLGF