Gene SeD_A1322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1322 
SymbolmotB 
ID6872799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1298294 
End bp1299223 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content55% 
IMG OID642784490 
Productflagellar motor protein MotB 
Protein accessionYP_002215160 
Protein GI198243979 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.300198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value5.1879400000000003e-23 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAATC AGGCTCATCC CATTGTCGTC GTAAAACGCC GCAGGCACAA ACCGCACGGC 
GGCGGGGCGC ACGGTTCCTG GAAAATTGCC TACGCCGATT TTATGACGGC GATGATGGCT
TTTTTTCTGG TGATGTGGCT GATTTCCATC TCCAGCCCTA AAGAATTAAT TCAGATTGCC
GAATATTTTC GTACGCCGTT GGCCACCGCG GTAACGGGGG GGAATCGGAT TGCCAATAGC
GAGAGCCCGA TACCAGGCGG CGGCGATGAT TACACCCAAC AGCAGGGTGA AGTGGAAAAG
CAGCCGAATA TCGACGAGCT GAAAAAACGG ATGGAGCAGA GTCGCTTAAA CAAACTGCGC
GGCGATCTGG ATCAACTGAT CGAATCCGAT CCCAAACTGC GCGCGTTACG TCCGCATCTG
AAAATTGATT TAGTTCAGGA GGGGTTGCGC ATCCAGATTA TCGACAGCCA GAACCGCCCG
ATGTTTAAAA CCGGCAGCGC CGAAGTTGAG CCGTATATGC GCGATATCCT GCGTGCGATT
GCGCCAGTGT TAAACGGTAT ACCTAATCGC ATTAGCCTGG CCGGCCATAC CGATGACTTT
CCCTACGCGA ACGGCGAAAA AGGCTATAGC AACTGGGAGT TATCCGCCGA TCGCGCCAAT
GCCTCGCGTC GCGAACTGGT CGCCGGCGGG CTGGATAACG GAAAAGTATT ACGGGTGGTT
GGCATGGCTG CCACGATGCG GCTGAGCGAT CGCGGTCCTG ATGACGCCAT CAACCGCCGT
ATAAGCCTGC TGGTGTTAAA CAAACAGGCG GAACAGGCCA TTTTGCATGA AAACGCTGAA
AGCCAGAATG AGCCGGTAAG TGTATTACAA CAGCCTGCGG CAGCCCCGCC GGCAAGCGTA
CCCACATCGC CAAAAGCGGA ACCGAGGTGA
 
Protein sequence
MKNQAHPIVV VKRRRHKPHG GGAHGSWKIA YADFMTAMMA FFLVMWLISI SSPKELIQIA 
EYFRTPLATA VTGGNRIANS ESPIPGGGDD YTQQQGEVEK QPNIDELKKR MEQSRLNKLR
GDLDQLIESD PKLRALRPHL KIDLVQEGLR IQIIDSQNRP MFKTGSAEVE PYMRDILRAI
APVLNGIPNR ISLAGHTDDF PYANGEKGYS NWELSADRAN ASRRELVAGG LDNGKVLRVV
GMAATMRLSD RGPDDAINRR ISLLVLNKQA EQAILHENAE SQNEPVSVLQ QPAAAPPASV
PTSPKAEPR