Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A1297 |
Symbol | uvrC |
ID | 6871904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 1280170 |
End bp | 1282002 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642784467 |
Product | excinuclease ABC subunit C |
Protein accession | YP_002215140 |
Protein GI | 198244405 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000512015 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.00000387597 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGTGAAA TATTTGACGC AAAGGCGTTT TTGAAAACCG TTACCAGCCA ACCCGGTGTC TATCGTATGT ATGACGCCGG CGGTACGGTT ATTTATGTCG GTAAAGCAAA AGACCTGAAA AAGCGTCTTT CCAGCTACTT TCGCAGCAAC CTGGCTTCGC GTAAAACCGA AGCGCTAGTT GCGCAAATTC AACACATTGA TGTCACGGTA ACGCATACCG AAACGGAAGC GCTGCTGCTT GAGCATAATT ACATCAAGTT GTATCAACCG CGTTACAACG TGTTGTTGCG TGATGATAAA TCCTATCCTT TTATTTTTCT GAGCGGCGAT ACCCATCCGC GTCTGGCGAT GCACCGTGGC GCCAAACATG CGAAAGGCGA GTACTTCGGC CCATTTCCTA ATGGCTATGC CGTGCGGGAA ACGCTGGCGC TGTTACAGAA AATTTTCCCT GTCCGCCAGT GCGAAAACAG CGTATATCGC AACCGCTCGC GTCCTTGCCT GCAATACCAG ATTGGCCGCT GCTTAGGCCC CTGCGTTGCA GGACTGGTCA GCGAGGAGGA GTATGCGCAA CAGGTGGAGT ATGTCCGGTT GTTTTTGTCC GGTAAGGACG ACCAGGTCTT AACACAGCTG ATTGCCCGGA TGGAAAAGGC CAGCCAGGAT CTGGCATTTG AAGAGGCGGC GCGTATTCGC GATCAGATCC AGGCGGTACG CCGGGTCACG GAGAGACAGT TTGTCTCCAA TGCGGGCGAC GATCTCGACG TTATCGGCGT GGCTTTTGAT GCGGGTATGG CCTGTGTGCA TGTGCTGTTT ATTCGCCAGG GTAAGGTGCT GGGCAGCCGC AGCTATTTTC CAAAAGTGCC TGGCGGTACG GAACTGGGCG AAGTGGTGGA AACCTTTGTC GGGCAGTTTT ACCTACAGGG TAGCCAGATG CGCACGCTAC CGGGCGAGAT ACTGCTCGAT TTTAATCTTA GCGATAAAAC GCTGCTGGCC GACTCGTTGT CGGAACTTGC CGGACGGCGT ATTCATGTCC AGACAAAACC GCGTGGCGAT CGCGCCCGTT ATCTCAAGCT GGCGCGGACC AACGCGGCAA CGGCCTTAAT CACTAAACTT TCGCAGCAGT CCACCATCAC GCAGCGTTTG ACTGCGCTGG CGGCGGTATT AAAACTTCCT GCGATCAAGC GGATGGAGTG TTTTGACATC AGCCATACCA TGGGGGAGCA AACGGTCGCA TCCTGTGTGG TATTTGACGC TAACGGGCCG TTACGCGCCG AGTATCGTCG TTATAATATC GCGGGTATCA CGCCGGGTGA TGACTACGCG GCGATGAATC AGGTGCTACG TCGGCGTTAT GGCAAGGCTA TAGAAGAAAG TAAGATTCCG GATGTTATTC TGATCGACGG CGGAAAAGGG CAGCTCGCCC AGGCGAAAGC CGTTTTTGCT GAGCTGGATG TCCCCTGGGA TAAGCATCGC CCTTTGCTGC TCGGCGTCGC CAAAGGCGCG GACAGAAAGG CCGGTCTGGA AACACTCTTT TTTGAACCGG AAGGCGAGGG GTTTAGCCTG CCGCCGGACT CGCCGGCGCT ACATGTTATT CAGCATATTC GCGATGAGTC GCACGATCAC GCGATCGGCG GGCACCGTAA AAAACGCGCG AAGGTTAAAA ATACCAGTAC GCTGGAAACT ATTGAAGGCG TTGGGCCTAA ACGTCGCCAG ATGCTGCTGA AATATATGGG CGGTTTGCAA GGACTACGTA ACGCCAGCGT AGAAGAAATT GCAAAAGTGC CGGGTATTTC GCAAGGTCTG GCAGAAAAGA TCTTCTGGTC GTTGAAACAT TGA
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Protein sequence | MSEIFDAKAF LKTVTSQPGV YRMYDAGGTV IYVGKAKDLK KRLSSYFRSN LASRKTEALV AQIQHIDVTV THTETEALLL EHNYIKLYQP RYNVLLRDDK SYPFIFLSGD THPRLAMHRG AKHAKGEYFG PFPNGYAVRE TLALLQKIFP VRQCENSVYR NRSRPCLQYQ IGRCLGPCVA GLVSEEEYAQ QVEYVRLFLS GKDDQVLTQL IARMEKASQD LAFEEAARIR DQIQAVRRVT ERQFVSNAGD DLDVIGVAFD AGMACVHVLF IRQGKVLGSR SYFPKVPGGT ELGEVVETFV GQFYLQGSQM RTLPGEILLD FNLSDKTLLA DSLSELAGRR IHVQTKPRGD RARYLKLART NAATALITKL SQQSTITQRL TALAAVLKLP AIKRMECFDI SHTMGEQTVA SCVVFDANGP LRAEYRRYNI AGITPGDDYA AMNQVLRRRY GKAIEESKIP DVILIDGGKG QLAQAKAVFA ELDVPWDKHR PLLLGVAKGA DRKAGLETLF FEPEGEGFSL PPDSPALHVI QHIRDESHDH AIGGHRKKRA KVKNTSTLET IEGVGPKRRQ MLLKYMGGLQ GLRNASVEEI AKVPGISQGL AEKIFWSLKH
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