| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1293 |
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| Symbol | |
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| ID | 6875684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 1278040 |
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| End bp | 1278762 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642784463 |
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| Product | DNA-binding transcriptional activator SdiA |
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| Protein accession | YP_002215136 |
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| Protein GI | 198243442 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.746399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.0000202879 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGGAAA ATGATTTCTT CACCTGGCGA CGCGCAATGT TGTTACGCTT TCAGGAGATG
GCGGCAGCAG AGGATGTTTA TACTGAATTG CAATATCAGA CACAGCGGCT GGAATTTGAT
TATTATGCCC TGTGTGTTCG TCATCCCGTC CCCTTTACCC GGCCTAAAAT ATCGCTTCGT
ACCACTTATC CTCCGGCGTG GGTAACGCAT TATCAGTCCG AAAACTATTT CGCGATCGAT
CCGGTATTAA AGCCGGAAAA TTTCAGGCAG GGTCATTTAC ATTGGGATGA CATGCTATTT
CATGAAGCGC AGGCGATGTG GGATGCCGCC CAGCGTTTCG GATTACGCAG AGGCGTAACC
CAGTGTGTGA TGTTGCCGAA CCGGGCGCTG GGCTTTTTAT CTTTCTCCCG TAGCAGTTTA
CGCTGCTCCT CGTTTACCTA CGATGAAGTG GAGCTGAGGT TACAACTGCT GGCGCGGGAG
AGTCTTTCGG CGCTGACAAG ATTTGAAGAC GACATGGTGA TGGCGCCTGA GATGCGTTTC
AGTAAACGTG AGAAAGAGAT TCTGAAGTGG ACGGCGGAAG GGAAGACCTC ATCAGAGATC
GCCATTATTC TGTCGATTTC TGAAAATACC GTTAACTTCC ATCAGAAAAA TATGCAGAAG
AAATTCAATG CGCCAAATAA AACACAGATT GCCTGCTACG CTGCGGCGAC AGGTCTGATA
TGA
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| Protein sequence | MQENDFFTWR RAMLLRFQEM AAAEDVYTEL QYQTQRLEFD YYALCVRHPV PFTRPKISLR
TTYPPAWVTH YQSENYFAID PVLKPENFRQ GHLHWDDMLF HEAQAMWDAA QRFGLRRGVT
QCVMLPNRAL GFLSFSRSSL RCSSFTYDEV ELRLQLLARE SLSALTRFED DMVMAPEMRF
SKREKEILKW TAEGKTSSEI AIILSISENT VNFHQKNMQK KFNAPNKTQI ACYAAATGLI
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