Gene SeD_A1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1285 
Symbol 
ID6875530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1269955 
End bp1271472 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content45% 
IMG OID642784456 
Productphase-1 flagellin 
Protein accessionYP_002215129 
Protein GI198242796 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.540983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.0231264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAAG TCATTAATAC AAACAGCCTG TCGCTGTTGA CCCAGAATAA CCTGAACAAA 
TCTCAGTCCT CACTGAGTTC CGCTATTGAG CGTCTGTCCT CTGGTCTGCG TATCAACAGC 
GCGAAAGACG ATGCGGCAGG CCAGGCGATT GCTAACCGCT TCACTTCTAA TATCAAAGGT 
CTGACTCAGG CTTCCCGTAA CGCTAACGAC GGCATTTCTA TTGCGCAGAC CACTGAAGGT 
GCGCTGAATG AAATCAACAA CAACCTGCAG CGTGTGCGTG AGTTGTCTGT TCAGGCCACT 
AACGGGACTA ACTCTGATTC CGATCTGAAA TCTATCCAGG ATGAAATTCA GCAACGTCTG 
GAAGAAATCG ATCGCGTTTC TAATCAGACT CAATTTAACG GTGTTAAAGT CCTGTCTCAG 
GACAACCAGA TGAAAATCCA GGTTGGTGCT AACGATGGTG AAACCATTAC CATCGATCTG 
CAAAAAATTG ATGTGAAAAG CCTTGGCCTT GATGGGTTCA ATGTTAATGG GCCAAAAGAA 
GCGACAGTGG GTGATCTGAA ATCCAGCTTC AAGAATGTTA CGGGTTACGA CACCTATGCA 
GCGGGTGCCG ATAAATATCG TGTAGATATT AATTCCGGTG CTGTAGTGAC TGATGCAGTA 
GCACCGGATA AAGTATATGT AAATGCAGCA AACGGTCAGT TAACAACTGA CGATGCGGAA 
AATAACACTG CGGTTGATCT CTTTAAGACC ACTAAATCTA CTGCTGGTAC CGCTGAAGCC 
AAAGCGATAG CTGGTGCCAT TAAAGGTGGT AAGGAAGGAG ATACCTTTGA TTATAAAGGC 
GTGACTTTTA CTATTGATAC AAAAACTGGT GATGACGGTA ATGGTAAGGT TTCTACTACC 
ATCAATGGTG AAAAAGTTAC GTTAACTGTC GCTGATATTG CCATTGGCGC GGCGGATGTT 
AATGCTGCTA CCTTACAATC AAGCAAAAAT GTTTATACAT CTGTAGTGAA CGGTCAGTTT 
ACTTTTGATG ATAAAACCAA AAACGAGAGT GCGAAACTTT CTGATTTGGA AGCAAACAAT 
GCTGTTAAGG GCGAAAGTAA AATTACAGTA AATGGGGCTG AATATACTGC TAACGCCACG 
GGTGATAAGA TCACCTTAGC TGGCAAAACC ATGTTTATTG ATAAAACAGC TTCTGGCGTA 
AGTACATTAA TCAATGAAGA CGCTGCCGCA GCCAAGAAAA GTACCGCTAA CCCACTGGCT 
TCAATTGATT CTGCATTGTC AAAAGTGGAC GCAGTTCGTT CTTCTCTGGG GGCAATTCAA 
AACCGTTTTG ATTCAGCCAT TACCAACCTT GGCAATACGG TAACCAATCT GAACTCCGCG 
CGTAGCCGTA TCGAAGATGC TGACTATGCA ACGGAAGTTT CTAATATGTC TAAAGCGCAG 
ATTCTGCAGC AGGCTGGTAC TTCCGTTCTG GCGCAGGCTA ACCAGGTTCC GCAAAACGTC 
CTCTCTTTAC TGCGTTAA
 
Protein sequence
MAQVINTNSL SLLTQNNLNK SQSSLSSAIE RLSSGLRINS AKDDAAGQAI ANRFTSNIKG 
LTQASRNAND GISIAQTTEG ALNEINNNLQ RVRELSVQAT NGTNSDSDLK SIQDEIQQRL 
EEIDRVSNQT QFNGVKVLSQ DNQMKIQVGA NDGETITIDL QKIDVKSLGL DGFNVNGPKE 
ATVGDLKSSF KNVTGYDTYA AGADKYRVDI NSGAVVTDAV APDKVYVNAA NGQLTTDDAE 
NNTAVDLFKT TKSTAGTAEA KAIAGAIKGG KEGDTFDYKG VTFTIDTKTG DDGNGKVSTT 
INGEKVTLTV ADIAIGAADV NAATLQSSKN VYTSVVNGQF TFDDKTKNES AKLSDLEANN 
AVKGESKITV NGAEYTANAT GDKITLAGKT MFIDKTASGV STLINEDAAA AKKSTANPLA 
SIDSALSKVD AVRSSLGAIQ NRFDSAITNL GNTVTNLNSA RSRIEDADYA TEVSNMSKAQ 
ILQQAGTSVL AQANQVPQNV LSLLR