Gene SeD_A1284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1284 
SymbolfliD 
ID6873421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1268293 
End bp1269699 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content44% 
IMG OID642784454 
Productflagellar capping protein 
Protein accessionYP_002215127 
Protein GI198245533 
COG category[N] Cell motility 
COG ID[COG1345] Flagellar capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0249279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.208358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCAA TTTCATCATT AGGTGTAGGG TCAAACTTAC CTCTGGATTC ACTGCTGACT 
AAACTGACCA ACGCTGAAAA AGGACGCTTA ACGCCGATCA CACAGCAGCA GAGTGCTAAT 
ACGGCCCGTC TAACGGCATA CGGTACTTTA AAAAGTGCAC TGGAGAAGTT TCAAACAGCA 
AACACGGCGT TAAATAAAGC CGATCTGTTT AAAAGTACGA ATGTCACCAG CAGTACAGAA 
GACCTGAAAG TCTCGACGGA AGCTGGGGCC GCACCTGGAA CTTATGTGGT TAGCGTAACT 
CAGTTAGCAC AAGCACAATC TTTGAGTACA GCAACCAAAA TTACATCTAC CAAAGAAGTG 
CTGGGAGATA CCACATCTGA CAGCCGTACC ATAAAAATTG AACAGAAAGG CCGTAAAGAA 
CCACTTGAAA TCAAGCTCAC TAAAGATCAA ACCTCTTTAG AGGGTATCCG TGACGCCATT 
AATGATGCTG ACAGTGGTAT TTCCGCCAGT ATCGTTAAAG TTAAAGAAGG CGATTATCAG 
CTTGTACTGA CCGCAGATAG TGGCACGGAT AATCAAATGA CTATCTCTGT GGAAGGCGAT 
AGCAAACTCA GCGATCTGTT GTCCTATGAT AGTAGTACTG GCACGGGCAA AATGAAGCAA 
CTGGTTGCTG CAGATAATGC TTTGTTAACC GTTAACGGCA TTGATATTGA GCGACCGAGT 
AATAAAATCA CTGACGCTCC ACAAGGCGTG ACGCTTGAAC TAACCAAAGA AGTAAAAGAT 
GCCCGTATTA CCGTCACAAA AGATAATGAA AAGGCGACCG AAGCCGTCAA AGGTTGGGTT 
GATGCCTACA ACTCACTGCT TGATACCTTT AGTTCATTAA CAAAATATAC AGAGGTTGAT 
CCAGGGGCTG AAGAACAGGA CAAAAACAAC GGTGCACTAC TTGGAGATAC CGTGGTGCGA 
ACGATTCAAA CTGGAATCCG CGCTCAGTTC GCTAATGGTG CAAGTACAGG TACATTTAAG 
ACCCTGAATG AAATTGGTAT TACTTCTGAT GGTACCACCG GAAAACTAAA AATTGATGAT 
ACCAAGCTTA AAAAAGCGCT GGATGAAAAT ACCGCTTCTG TACGTGAGCT GCTGGTAGGT 
GATGGTAAAG AAACGGGGAT CACCACCAAA ATTGCCACCG AAGTGAAAAG TTATCTGGCC 
GATGACGGCA TTATTGACAG CGCCCAGGAC AGTATTAACG CCACGCTGAA AAAGCTGACT 
AAGCAATATC TGACCGTCAG CAGTAGCATT GACGACACCG TTGCCCGTTA CAAGGCCCAG 
TTTACCCAAC TGGATACCAT GATGAGTAAG CTGAATAACA CCAGTACTTA TTTGACCCAG 
CAATTTAATG CTATGAACAA GTCCTGA
 
Protein sequence
MASISSLGVG SNLPLDSLLT KLTNAEKGRL TPITQQQSAN TARLTAYGTL KSALEKFQTA 
NTALNKADLF KSTNVTSSTE DLKVSTEAGA APGTYVVSVT QLAQAQSLST ATKITSTKEV 
LGDTTSDSRT IKIEQKGRKE PLEIKLTKDQ TSLEGIRDAI NDADSGISAS IVKVKEGDYQ 
LVLTADSGTD NQMTISVEGD SKLSDLLSYD SSTGTGKMKQ LVAADNALLT VNGIDIERPS 
NKITDAPQGV TLELTKEVKD ARITVTKDNE KATEAVKGWV DAYNSLLDTF SSLTKYTEVD 
PGAEEQDKNN GALLGDTVVR TIQTGIRAQF ANGASTGTFK TLNEIGITSD GTTGKLKIDD 
TKLKKALDEN TASVRELLVG DGKETGITTK IATEVKSYLA DDGIIDSAQD SINATLKKLT 
KQYLTVSSSI DDTVARYKAQ FTQLDTMMSK LNNTSTYLTQ QFNAMNKS