Gene SeD_A1281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1281 
Symbol 
ID6873059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1267503 
End bp1267871 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content50% 
IMG OID642784452 
Productflagellar biosynthesis protein FliT 
Protein accessionYP_002215125 
Protein GI198244556 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000909072 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.322252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCAA CCGTGGAGTT TATCAACCGT TGGCAGCGTA TTGCGCTGCT CAGTCAATCG 
CTGCTTGAAC TTGCGCAGCG AGGTGAATGG GATCTCTTAC TGCAACAAGA GGTCTCCTAT 
CTGCAAAGTA TTGAAACGGT GATGGAAAAG CAAACTCCAC CGGGCATTAC GCGAAGTATT 
CAGGATATGG TCGCCGGATA CATCAAACAA ACGCTGGATA ATGAGCAGCT CCTGAAAGGG 
CTGCTGCAAC AGCGACTGGA TGAACTCAGT AGTTTGATCG GACAATCCAC CCGCCAAAAA 
TCACTCAACA ACGCTTATGG CCGTCTTTCC GGTATGTTAC TCGTGCCAGA CGCGCCTGGC 
GCCTCATAA
 
Protein sequence
MTSTVEFINR WQRIALLSQS LLELAQRGEW DLLLQQEVSY LQSIETVMEK QTPPGITRSI 
QDMVAGYIKQ TLDNEQLLKG LLQQRLDELS SLIGQSTRQK SLNNAYGRLS GMLLVPDAPG 
AS