Gene SeD_A1275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1275 
SymbolfliE 
ID6870981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1262788 
End bp1263102 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content57% 
IMG OID642784446 
Productflagellar hook-basal body protein FliE 
Protein accessionYP_002215119 
Protein GI198243733 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.654615 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAA TACAGGGGAT TGAAGGGGTT ATTAGCCAGT TACAGGCGAC GGCGATGGCC 
GCGCGCGGGC AAGACACGCA CTCGCAGTCG ACGGTGAGTT TTGCCGGCCA GCTACATGCT
GCGCTGGATC GTATTAGCGA CAGACAGACG GCGGCGCGCG TTCAGGCGGA AAAATTCACT
CTGGGTGAGC CGGGCATTGC GCTTAATGAC GTGATGGCCG ATATGCAAAA AGCGTCCGTC
TCCATGCAAA TGGGGATTCA GGTGCGCAAC AAGCTGGTCG CCGCGTATCA GGAAGTGATG
TCTATGCAGG TTTAA
 
Protein sequence
MAAIQGIEGV ISQLQATAMA ARGQDTHSQS TVSFAGQLHA ALDRISDRQT AARVQAEKFT 
LGEPGIALND VMADMQKASV SMQMGIQVRN KLVAAYQEVM SMQV