| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1273 |
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| Symbol | fliF |
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| ID | 6874681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1260898 |
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| End bp | 1262628 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642784444 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_002215117 |
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| Protein GI | 198243509 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.904513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTCTTG TTCCACTTTG CAAAAAACGC CGTCCACGAT CAGTCACGAG GTGCGAGATG
AGTGCGACTG CAACCCAACC TAAACCTCTC GAGTGGCTTA ATCGCCTACG CGCGAATCCC
CGAATTCCGT TAATTGTGGC GGGTTCCGCT GCCGTGGCGA TCGTCGTTGC GATGGTGCTG
TGGGCCAAAA CGCCCGATTA CCGCACGCTA TTTAGCAACC TTTCCGATCA GGACGGCGGC
GCGATCGTCG CGCAGTTGAC CCAGATGAAT ATCCCCTATC GCTTTGCCAA TGGCAGCGGC
GCGATTGAAG TGCCCGCCGA CAAAGTGCAT GAACTGCGTC TGCGTCTGGC GCAGCAGGGG
CTGCCTAAAG GCGGCGCGGT AGGCTTTGAA CTGCTTGATC AGGAAAAATT CGGTATCAGT
CAGTTCAGCG AGCAGGTGAA TTATCAGCGC GCACTGGAAG GTGAACTGGC CCGGACGATC
GAGACGCTGG GTCCGGTAAA AAGCGCCCGC GTTCACCTGG CGATGCCAAA GCCGTCGCTA
TTTGTGCGGG AACAAAAATC CCCTTCCGCC TCCGTCACCG TCACACTGGA ACCGGGTCGG
GCGCTGGATG AAGGACAAAT TAGCGCCGTG GTACATCTGG TTTCCAGCGC TGTCGCCGGT
TTGCCGCCAG GAAACGTCAC TCTGGTCGAT CAATCCGGTC ATCTGCTCAC GCAATCCAAT
ACCAGCGGTC GCGACCTTAA TGACGCGCAA TTAAAATTTG CTAATGATGT GGAAAGCCGC
ATCCAACGCC GTATCGAAGC CATTCTGTCG CCTATCGTCG GGAACGGTAA TGTTCACGCT
CAGGTAACCG CCCAGTTGGA TTTTGCCAAT AAAGAGCAGA CGGAAGAGCA CTACAGCCCG
AACGGCGATG CGTCGAAGGC CACCCTGCGT TCACGTCAGT TGAATATTAG CGAACAGGTA
GGCGCGGGCT ATCCCGGCGG CGTGCCTGGC GCGCTGTCGA ACCAACCAGC GCCGCCTAAC
GAGGCGCCGA TCGCCACGCC GCCGACCAAT CAACAAAACG CGCAGAATAC GCCACAAACC
AGCACCAGTA CCAACAGTAA CAGTGCTGGC CCGCGCAATA CGCAGCGTAA TGAAACCAGT
AACTACGAAG TGGACCGCAC CATTCGTCAC ACCAAAATGA ATGTGGGCGA TATTGAGCGT
CTCTCCGTGG CCGTCGTGGT GAATTACAAA ACGCTGGCGG ATGGCAAACC GCTGCCATTG
ACCGCCGATC AGATGAAACA GATCGAGGAT TTAACCCGTG AAGCGATGGG TTTTTCTGAT
AAACGCGGCG ATACGCTAAA CGTGGTGAAT TCACCGTTTA GCGCAGTGGA TAACACCGGC
GGCGAACTGC CCTTCTGGCA ACAGCAGTCC TTTATCGATC AGTTGCTCGC GGCAGGTCGC
TGGTTACTGG TGCTGGTGGT GGCCTGGATT CTGTGGCGCA AAGCGGTACG TCCGCAGTTG
ACGCGCCGCG TTGAAGAAGC GAAAGCGGCG CAGGAACAGG CACAGGTTCG CCAGGAAACC
GAAGAAGCCG TGGAAGTACG CCTTAGCAAA GACGAGCAGC TCCAGCAACG CCGGGCTAAC
CAGCGTCTGG GTGCTGAGGT GATGAGCCAG CGTATTCGCG AAATGTCAGA CAACGATCCG
CGCGTTGTGG CGCTGGTCAT TCGCCAGTGG ATGAGTAACG ATCATGAGTA A
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| Protein sequence | MSLVPLCKKR RPRSVTRCEM SATATQPKPL EWLNRLRANP RIPLIVAGSA AVAIVVAMVL
WAKTPDYRTL FSNLSDQDGG AIVAQLTQMN IPYRFANGSG AIEVPADKVH ELRLRLAQQG
LPKGGAVGFE LLDQEKFGIS QFSEQVNYQR ALEGELARTI ETLGPVKSAR VHLAMPKPSL
FVREQKSPSA SVTVTLEPGR ALDEGQISAV VHLVSSAVAG LPPGNVTLVD QSGHLLTQSN
TSGRDLNDAQ LKFANDVESR IQRRIEAILS PIVGNGNVHA QVTAQLDFAN KEQTEEHYSP
NGDASKATLR SRQLNISEQV GAGYPGGVPG ALSNQPAPPN EAPIATPPTN QQNAQNTPQT
STSTNSNSAG PRNTQRNETS NYEVDRTIRH TKMNVGDIER LSVAVVVNYK TLADGKPLPL
TADQMKQIED LTREAMGFSD KRGDTLNVVN SPFSAVDNTG GELPFWQQQS FIDQLLAAGR
WLLVLVVAWI LWRKAVRPQL TRRVEEAKAA QEQAQVRQET EEAVEVRLSK DEQLQQRRAN
QRLGAEVMSQ RIREMSDNDP RVVALVIRQW MSNDHE
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