Gene SeD_A1271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1271 
SymbolfliH 
ID6874543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1259210 
End bp1259917 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content61% 
IMG OID642784442 
Productflagellar assembly protein H 
Protein accessionYP_002215115 
Protein GI198245604 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1317] Flagellar biosynthesis/type III secretory pathway protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.640019 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAATG AATTGCCTTG GCAAGTCTGG ACCCCCGACG ATCTCGCCCC GCCGCCGGAG 
ACGTTTGTGC CGGTTGAGGC TGATAACGTG ACCTTGACAG ACGATACGCC GGAGCCCGAA
CTCACTGCCG AACAGCAGCT GGAGCAGGAG CTGGCGCAGC TAAAAATACA GGCCCATGAA
CAAGGTTATA ACGCCGGGCT GGCGGAGGGA CGGCAAAAAG GACACGCGCA GGGATACCAG
GAAGGGTTAG CGCAGGGGCT GGAGCAAGGA CAAGCCCAGG CGCAGACGCA GCAGGCGCCG
ATTCATGCCC GTATGCAGCA GTTAGTGAGC GAGTTTCAGA ACACACTTGA CGCGCTCGAT
AGCGTTATCG CCTCACGGCT GATGCAAATG GCCCTGGAGG CTGCGCGTCA GGTCATCGGC
CAAACGCCGG CGGTGGACAA CTCAGCGCTG ATTAAACAGA TCCAACAACT GTTGCAGCAA
GAGCCGCTCT TTAGCGGCAA GCCGCAGTTG CGCGTGCATC CGGACGACTT ACAGCGGGTG
GAAGAGATGC TGGGCGCCAC GCTCAGCCTT CACGGATGGC GGTTACGCGG CGATCCAACG
TTGCATCACG GCGGGTGTAA AGTCTCTGCC GATGAGGGCG ATCTGGACGC CAGCGTCGCT
ACTCGCTGGC AAGAGTTGTG TCGCCTGGCG GCGCCGGGAG TGCTCTGA
 
Protein sequence
MSNELPWQVW TPDDLAPPPE TFVPVEADNV TLTDDTPEPE LTAEQQLEQE LAQLKIQAHE 
QGYNAGLAEG RQKGHAQGYQ EGLAQGLEQG QAQAQTQQAP IHARMQQLVS EFQNTLDALD
SVIASRLMQM ALEAARQVIG QTPAVDNSAL IKQIQQLLQQ EPLFSGKPQL RVHPDDLQRV
EEMLGATLSL HGWRLRGDPT LHHGGCKVSA DEGDLDASVA TRWQELCRLA APGVL