Gene SeD_A1263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1263 
SymbolfliP 
ID6873887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1253056 
End bp1253793 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content53% 
IMG OID642784434 
Productflagellar biosynthesis protein FliP 
Protein accessionYP_002215107 
Protein GI198244709 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1338] Flagellar biosynthesis pathway, component FliP 
TIGRFAM ID[TIGR01103] flagellar biosynthetic protein FliP 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.708489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGTT TGTTATTCCT TTCTCTGGCG GGTCTGTGGC TTTTTAGTCC CGCCGCTGCT 
GCGCAACTGC CGGGGCTTAT CAGCCAACCA TTAGCGGGCG GAGGCCAAAG CTGGTCATTA
TCCGTCCAGA CGCTGGTTTT CATCACCTCG CTGACGTTTC TGCCGGCGAT TTTACTGATG
ATGACGAGCT TCACGCGTAT CATCATTGTT TTTGGCCTGT TGCGTAACGC GCTGGGCACG
CCCTCGGCAC CGCCAAATCA GGTGTTACTC GGACTGGCGT TGTTTTTGAC CTTTTTTATT
ATGTCGCCCG TCATTGACAA GATTTACGTG GATGCTTACC AGCCGTTTAG CGAGCAGAAA
ATTTCTATGC AGGAAGCGCT GGATAAAGGC GCGCAACCGT TACGCGCGTT CATGTTGCGC
CAAACCCGCG AAGCCGATCT GGCGCTGTTT GCCCGTCTGG CCAATAGCGG TCCGTTACAG
GGACCGGAAG CAGTACCGAT GCGTATCCTC CTGCCCGCTT ATGTCACCAG CGAATTAAAG
ACGGCATTTC AGATCGGTTT TACGATTTTT ATCCCTTTTT TGATTATCGA CCTGGTGATC
GCCAGCGTAT TGATGGCGTT AGGGATGATG ATGGTGCCGC CAGCGACAAT CGCCCTGCCG
TTTAAGCTGA TGCTGTTTGT GCTGGTCGAT GGTTGGCAAT TGCTTGTGGG GTCGCTGGCC
CAAAGCTTTT ACAGTTAG
 
Protein sequence
MRRLLFLSLA GLWLFSPAAA AQLPGLISQP LAGGGQSWSL SVQTLVFITS LTFLPAILLM 
MTSFTRIIIV FGLLRNALGT PSAPPNQVLL GLALFLTFFI MSPVIDKIYV DAYQPFSEQK
ISMQEALDKG AQPLRAFMLR QTREADLALF ARLANSGPLQ GPEAVPMRIL LPAYVTSELK
TAFQIGFTIF IPFLIIDLVI ASVLMALGMM MVPPATIALP FKLMLFVLVD GWQLLVGSLA
QSFYS