Gene SeD_A1252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1252 
Symbol 
ID6874586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1246305 
End bp1247216 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content54% 
IMG OID642784424 
Producthypothetical protein 
Protein accessionYP_002215097 
Protein GI198244190 
COG category[S] Function unknown 
COG ID[COG2354] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.8726 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAGGAA GTAGCTTACT GACATTACTC GACGATATCG CCACGCTGCT GGACGATATT 
TCGGTAATGG GCAAATTGGC CGCGAAAAAA ACCGCGGGCG TACTGGGAGA CGACCTGTCG 
CTCAATGCGC AGCAGGTGAC CGGCGTTCGC GCTAATCGCG AGCTGCCAGT GGTATGGAGC 
GTGGCGAAAG GATCATTAAT CAACAAGGTT ATTCTGGTGC CGTTGGCGCT GCTGATAAGC 
GCATTTATCC CGTGGGCCAT CACGCCTTTA TTAATGTTAG GCGGCGCGTT TCTCTGCTTT 
GAAGGGGTAG AAAAAGTCCT GCATACCTTT GAGGCGCGAA AACACAAAGA AGACCCGGCG 
GAGCGGCAAA AACGTCTTGA GGCGCTGGCT GCGCAAGATC CTTTGGCCTT TGAAAAAGAT 
AAAGTAAAAG GGGCGGTCCG TACCGATTTC ATTCTGTCCG CTGAAATTGT GGCCATTACC 
CTGGGGATTG TCGCGCAGGC GCCGCTGCTT AATCAGGTGT TGGTGCTGGC GGGGATTGCG 
TTGGTTGTGA CCATTGGCGT GTATGGCCTG GTGGGTATTA TTGTCAAACT GGATGATATG 
GGGTACTGGT TGGCGGAAAA GCGTAGCGTG CTGGCGCAGG GCGTCGGTAA AGGATTACTG 
ATTATCGCGC CCTGGTTAAT GAAAGCATTA TCCATTGTCG GTACGCTGGC GATGTTTCTG 
GTCGGTGGCG GGATTGTCGT ACACGGTATT GCGCCGCTAC ACCATGCCAT TGAACATTTT 
GCGCAGCAGC AGGGGGCTTT CATAGCGCAT ACGATCCCTG CGGGGCTGAA TCTGGTGCTC 
GGCTTTATTA TCGGCGCCAT TGTGGTGGCG CTGGTGAAAG GTGTGGCGAA AATTCGCGGT 
GTTTCGCACT GA
 
Protein sequence
MAGSSLLTLL DDIATLLDDI SVMGKLAAKK TAGVLGDDLS LNAQQVTGVR ANRELPVVWS 
VAKGSLINKV ILVPLALLIS AFIPWAITPL LMLGGAFLCF EGVEKVLHTF EARKHKEDPA 
ERQKRLEALA AQDPLAFEKD KVKGAVRTDF ILSAEIVAIT LGIVAQAPLL NQVLVLAGIA 
LVVTIGVYGL VGIIVKLDDM GYWLAEKRSV LAQGVGKGLL IIAPWLMKAL SIVGTLAMFL 
VGGGIVVHGI APLHHAIEHF AQQQGAFIAH TIPAGLNLVL GFIIGAIVVA LVKGVAKIRG 
VSH