| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1231 |
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| Symbol | |
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| ID | 6871623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1225500 |
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| End bp | 1226003 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642784410 |
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| Product | type VI secretion protein |
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| Protein accession | YP_002215083 |
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| Protein GI | 198245588 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.137782 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAAAG ATTATAACGG CAGCGTGGCA CCCAAAGAAC GCATTAATAT TTCTTACATT
CCAAAAACGG ACGGTGAGCC TTCTGAGGTG GAATTACCCC TTAATATGTT GATAGTGGGG
GATACCGGAA ACTCACAGGA AACAGCGCCA CTTGATGAAC GCCAGATGGT TTCTATCGAC
AAACATTCAT TCAATTCAGT GATGGCAGAA GCGTCCATTA GCCTGAATTT TGCAGTTCCG
GCATCATTGA AGGACGACGC AAAAGATGGC GATGAGATGA ATATCTCGCT GGAAATCAAA
TCCCTGAACG ATTTTTCTCC GGACAGCGTG GCAAAACAGG TACCGGAGTT GAACAAATTG
CTGGAACTAC GCGAAGCGCT GACAGCATTA AAAGGCCCGC TCGGTAATCT GCCTGCATTT
CGCGCCCAGC TTCAGGCATT GCTGGAAAAT GAAGAATCCC GCGAACAGTT ACTGCGGGAG
ATCAGCCAGG CAGAAAACCA GTAA
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| Protein sequence | MSKDYNGSVA PKERINISYI PKTDGEPSEV ELPLNMLIVG DTGNSQETAP LDERQMVSID
KHSFNSVMAE ASISLNFAVP ASLKDDAKDG DEMNISLEIK SLNDFSPDSV AKQVPELNKL
LELREALTAL KGPLGNLPAF RAQLQALLEN EESREQLLRE ISQAENQ
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