| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1227 |
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| Symbol | |
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| ID | 6873167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1221466 |
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| End bp | 1223319 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642784406 |
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| Product | hypothetical protein |
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| Protein accession | YP_002215079 |
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| Protein GI | 198243146 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 0.366123 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTCG AAGAACGCTA TTACAGGCAG GAGTTGGATC ACCTGCGGCA GTTGAGCAAG
CTGCTGGCGA CCGAAAAGCC GCATCTGGCC CGGTTTCTGG CAGAAAAAGA GGCCGATCCG
GATATCGAGC GTCTGCTGGA GGGCGTGGCC TTTCTGACCG GCAATCTGCG CCAGAAAATC
GAGGATGAGT TTCCGGAGCT GACGCACGGA CTGATCCGGA TGCTGTGGCC CAATTATCTG
CGCCCGGTGC CGTCGATGAC GCTGATTGAA TATACGCCGG ATATGGATAA AACTTCCGTG
CCGGTACTGA TCCCCCGTAA TGAGCAGTTC ACAACCGGGG CGAAGGGGAC TCAGGGAAAC
CCGGTATTGT CTGCGTATTC CGGCAATGAG CACGATGTAG CCCCGCCCTG TACGTTCACC
CTGTGCCGGG ATATCTGGCT GTTACCCGTT CAACTGGATC AGGTTGAAAA TCGCAGTACG
CCCCGCCACG GCATTATTGA TATTACGTTT GCCGTCGCAC CGGGCACTGA TTTTGCCACG
CTGGATCTGA ACAGGCTGCG CTTCTGGCTG GGCAACGATG ATAACTATAC CCGCTATCAG
CTTTATCTGT GGTTTTGTGA ATATTTACAG GGCGCAGAGT TGATGGCGGG CGGGCAGTCG
AGCCCGATGC CTGAATTTAT GCTGAAAGCG GTGGGTTTTG AGTCAGAGGA CGCCATGCTG
CCCTGGCCCG GCAATGTCCA CAGCGGCTAC CGCATTCTCC AGGAGTTTTT CTGCTACGCC
GACAGTTTTC TGTTTTTCGA TGCCTGTGGC ATTCCGGCAT TGCCAGACAG GTTAAAGGAG
AACCGTTTCA CTCTGCGGCT GCGGTTTTCT CGCCCCTTAC CGGCAGATAT CCGGCTGCGG
GATGATTCCC TGCGCTTATA TTGTGCGCCC GCCATTAATC TGTTTGCCCA CCATGCCGAA
GCCATCACGC TGGATCATCA GCGGCAGGAT TACGCTCTGG TTCCCAGCCG TCATTTTCCG
GATCATTACG ACATTTTTTC GGTTAACAGC GTGGTGAGTC AGACGCAGGG GAAGCAGAGA
AAAGCGGATC TTGGACGGCC GGTGATCACA GAGGCCGCGC GCCACTGGCC TGCTTTTGAG
AGTTTCCGCC ACCAGATGGA GTACAGCCGT AAGCGGGAAG TGGTCTACTG GCAGCACCGG
ACCAGGACCT CGCTGTTTCA CCGGGGCTTT GATCATACCC TAGCTTTTAT TCATGCCGAT
GGCAGCCTCC CGGATGCCTC ACTGCTTAAT AATGAAGTGG TTTCTGTATC GCTGACCTGC
ACCAACCGGG AGCTGCCGGT ACAGCTACGG CCCGGCGATA TCACCGGTAC GACAGGTAAA
AACGCGTCGG TGGCGTCATT TCGCAATATC ACCCGCCCCA CCAGACCGCT CTGGCCGGTG
ATTGACGGCA GCCTGCACTG GTCGTTGCTG TCTGCCATGA ACCTGAATTA TCTGTCGTTG
CTGGATGCTG ATGCGCTCAA ACAGGTGATC GCCAATTTTG ATCGCCACGC CATCCATCAT
CCGCAGATGG CCCGTCTGTC ACAGCAGAAG CTGGACGCCA TTGAACGGCT GGAAACAACC
CCGGTTGATC GCCTGTTTAC CGGCATACCG GTGCGCGGGC TGGCGTCCAC CCTGTCCATT
CATCCGGAGC CGTTTGTCTG CGAGGGTGAA ATGTACCTGC TGGGCGCGGT GCTGTCGCAT
TTTCTGTCGC TGTACGCCAG CGTCAATTCG TTCCACATGC TGACCGTCGT TAACACGGAA
AGCCAGGAGT CATGGAAATG GGCGGAAAGA ACCGGGCAAC ACCCGCTCAT CTGA
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| Protein sequence | MEFEERYYRQ ELDHLRQLSK LLATEKPHLA RFLAEKEADP DIERLLEGVA FLTGNLRQKI
EDEFPELTHG LIRMLWPNYL RPVPSMTLIE YTPDMDKTSV PVLIPRNEQF TTGAKGTQGN
PVLSAYSGNE HDVAPPCTFT LCRDIWLLPV QLDQVENRST PRHGIIDITF AVAPGTDFAT
LDLNRLRFWL GNDDNYTRYQ LYLWFCEYLQ GAELMAGGQS SPMPEFMLKA VGFESEDAML
PWPGNVHSGY RILQEFFCYA DSFLFFDACG IPALPDRLKE NRFTLRLRFS RPLPADIRLR
DDSLRLYCAP AINLFAHHAE AITLDHQRQD YALVPSRHFP DHYDIFSVNS VVSQTQGKQR
KADLGRPVIT EAARHWPAFE SFRHQMEYSR KREVVYWQHR TRTSLFHRGF DHTLAFIHAD
GSLPDASLLN NEVVSVSLTC TNRELPVQLR PGDITGTTGK NASVASFRNI TRPTRPLWPV
IDGSLHWSLL SAMNLNYLSL LDADALKQVI ANFDRHAIHH PQMARLSQQK LDAIERLETT
PVDRLFTGIP VRGLASTLSI HPEPFVCEGE MYLLGAVLSH FLSLYASVNS FHMLTVVNTE
SQESWKWAER TGQHPLI
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