| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1223 |
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| Symbol | |
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| ID | 6873049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1217239 |
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| End bp | 1218570 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642784402 |
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| Product | hypothetical protein |
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| Protein accession | YP_002215075 |
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| Protein GI | 198241763 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 0.629455 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCA CGCGAAACAA GGTGATGTGG CGGGAAGGAA CGCTGATGCG TCCGCACCAT
CTCCAGCAGC AACAACGTTA TAACGATTAT GTGAATAATC TGCGTTTCCG GGCCATTCAT
GATTTGTCCT GGGGATTTAC CGAGCTTTCC CTCAATGATG AGCTGCTGGG ACAGGGCAAA
ATTATGATCG ACAGCGCGTC GGGCACCCTG CCGGACGGCA CCGTGTTTTC CCTTCCGGAC
CAGGATGCGC TCCCCGATCC GCTGCATCCG GACAGTTTTC CTGATGAAGA AAGCCGCAAT
GTCTATCTGG CTTTACCCGT TGCCAGCGAT GTGAGAGGCG AAGTCAGTTA CGGGCAGCAG
GTTGGGCGTT ACCGGCTGAA CGATGCCAGT GTCCGGGATC TGCACTCCGA GAATGGCGAT
GCCCGGACGC TGACGCTGGG CCAGTTGACC CCCCGCATTA TGAGCGGAGC GGACGATATG
AGCGCGTATG TCACGTTGCC GCTGTGCCGT ATCAAAGACA GGCGTGCGGA CGGCTCCCTG
ATGCTGGATG AAAACTTTAT CCCTACCTGC CAGAACGTTT ATGTCAGCGC ACGGCTGCGT
GAATTTCTCC GGGAAGTCCA GGAAGCGGTT GGCGGCCGGG CCAATGACCT GGCTAACCGC
ATTGGCTCTC CGGCGCAAAG CGGTATTGCC GACGTTGCGG AATTTATGAT GCTGCAACTG
CTCAACCGTA ACCAGACGCG GTTCACCCAC CGCGCCCGCA GGCCGCACCT CCATCCGGAA
GATTTTTATC TCGATCTGGC CGGACTGCTG GGCGAGCTGA TGACATTTAC CGAGCCATCC
CGCCTGCCCT GTCCGCTGGA TGTCTACGAT CACCGTAACC TGACGGACAC CTTCAAAACG
CTGTTGCCGG AAGTGAAACG GGCATTACAT ACCGTCCTGT CGCCCAGGGC GGTTAACCTG
CCGCTGCATC TGCGCGATGG CATCTGGCAG GCTGACGTAC ATGACTCCAC GCTGTTGCAG
TCGGCCACCT TCGTGCTGGC GGTGGCGGCG AAAATGGAGA CGCTGCAACT CCAGCGCCAG
TTTATCCAGC AGTCAAAAAT TTCCTCGCCG GAAAAAATCC GCAATATGGT CAGCGTGCAA
ATCCCCGGCA TCCCGCTGCA TACGCTGATG GTGGCCCCCC GCCAGCTTCC GTACCATGCC
GGTTTCAGCT ATTTCGAACT GGACAAGAGC GGGGCCGCCT GGGCGGATGT GGCGGCCACC
GGCGCTGTCG CCCTGCATGT TTCCGGTACG TTCCCGGATC TGAACATGCA ACTGTGGGCC
ATAAGAGGAT AA
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| Protein sequence | MATTRNKVMW REGTLMRPHH LQQQQRYNDY VNNLRFRAIH DLSWGFTELS LNDELLGQGK
IMIDSASGTL PDGTVFSLPD QDALPDPLHP DSFPDEESRN VYLALPVASD VRGEVSYGQQ
VGRYRLNDAS VRDLHSENGD ARTLTLGQLT PRIMSGADDM SAYVTLPLCR IKDRRADGSL
MLDENFIPTC QNVYVSARLR EFLREVQEAV GGRANDLANR IGSPAQSGIA DVAEFMMLQL
LNRNQTRFTH RARRPHLHPE DFYLDLAGLL GELMTFTEPS RLPCPLDVYD HRNLTDTFKT
LLPEVKRALH TVLSPRAVNL PLHLRDGIWQ ADVHDSTLLQ SATFVLAVAA KMETLQLQRQ
FIQQSKISSP EKIRNMVSVQ IPGIPLHTLM VAPRQLPYHA GFSYFELDKS GAAWADVAAT
GAVALHVSGT FPDLNMQLWA IRG
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