Gene SeD_A1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1217 
Symbol 
ID6871874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1206665 
End bp1208029 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content60% 
IMG OID642784396 
ProductImpA domain-containing protein 
Protein accessionYP_002215069 
Protein GI198246064 
COG category[S] Function unknown 
COG ID[COG3515] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.249719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.176595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGG ACGCACTCAC GCACATTATT GTTACCGGCC AGGATCCGCG CGGCCTGCCG 
GAGTTCAGCG CCCTGCGGGA AGAGATCAAC AAATCGTCTC ACCCGTCGCA GCCGGAGCTG 
AACTGGAAAC TGGTGGAATC GCTGGCGCTG GCCATTTTTA AAGCCCATGG CGTGGATCTG 
CACACGGCCA CTTATTACAC CCTGGCGCGC ACCCGCACGC ACGGCCTGGC CGGATTTTGC 
GAAGGGGTGG AGCTACTGGC GGCCATGATA AGCCACGACT GGGACAAATT CTGGCCGCAG 
GATGAGTCAG CCCGCACCGG GATGCTTGAC TGGCTTAATT CGCGCACCGG CAATATTCTG 
CGCCAGCAGC TGTCCTTCTC CGGCGCGGAC CTGCCGTTGC TGTACCGCAC CGAACGGGCG 
TTACAGTTGA TTTGCGACAA ACTCCAGCAG GTGGAACTGA AACGCCAGCC GCATGTGGAG 
AACCTGCTTT ATTTTGTGCA GAACACACGT AAGCGGCTTG AGCCGCCGCC GAAAAGCAGC 
GTGGACATTC CGCCGCAGAC CACCGTCAGA ACGTTGATCT ACGCCCCGGA GAGCACGCAG 
CCCCTCACGG CGGAAAACCT TCCGCCCCTG CCTGAGTTGC CGGAAATGAA GGTGGAAGTC 
CACCACGGCG CGGTGGAGGA TCCAGAGCCT GTCGCCAGGG CCACGTCAGG CCGGACTATA 
AAAGGCTTTA TGGCCGGTGT CGTCTGCGCT GCGGCTGTCG CAGCCGCACT CTGGTGGTGG 
CAGGTGTACC CGATGCAACA GCAACTGGCG CAGGTAAGGG ACACGGCGCA GGGCGCGGCA 
ATGCTCTGGC TGGCCTCGCC TGAACTGGAC AGCTACGGGC AGCGGTTACA ACAGCTTCCC 
GACGCCTCGC CGCTGCAACT GCTGGAGGCG GGGATGCAGA TGATGCATAC CGCAGACAGC 
CGCTGGCCGG AGAGTCTGCA ACAGCAGCAG GCAACAGCGC AGTGGAATGA AATCCTGAAA 
ACCCGCGCGC AAAGCAGCCC ACAAATGCGC GGCTGGCAGC AGGCGCGCCA GAATCTGCGT 
GACTTTGCTG ACCTGATGAT GCAGCGGGAA ACGGAGAAGC AGGGCTTTAC CCTCTCCTAT 
ATTAAAACGG TGACCTGGCA GGCGGAACGC CTGCTGAACC AGGAAACGCC GCTGGAGTCC 
CTGCTGACGC AGTACCAAGA TGCCCGCGCT CAGGGACGGA ATGCGGAGGT GCTGGAAAAA 
CAAATTAATG AACGGCTGGA TGGGGTGTTA AGCCGCTGGC TGTTGCTGAA AAACAATGTA 
GTGCCGGAAA CGGCAACTAA AGCCCCCCCC GAAAATAATA GTTAA
 
Protein sequence
MSQDALTHII VTGQDPRGLP EFSALREEIN KSSHPSQPEL NWKLVESLAL AIFKAHGVDL 
HTATYYTLAR TRTHGLAGFC EGVELLAAMI SHDWDKFWPQ DESARTGMLD WLNSRTGNIL 
RQQLSFSGAD LPLLYRTERA LQLICDKLQQ VELKRQPHVE NLLYFVQNTR KRLEPPPKSS 
VDIPPQTTVR TLIYAPESTQ PLTAENLPPL PELPEMKVEV HHGAVEDPEP VARATSGRTI 
KGFMAGVVCA AAVAAALWWW QVYPMQQQLA QVRDTAQGAA MLWLASPELD SYGQRLQQLP 
DASPLQLLEA GMQMMHTADS RWPESLQQQQ ATAQWNEILK TRAQSSPQMR GWQQARQNLR 
DFADLMMQRE TEKQGFTLSY IKTVTWQAER LLNQETPLES LLTQYQDARA QGRNAEVLEK 
QINERLDGVL SRWLLLKNNV VPETATKAPP ENNS