Gene SeD_A1209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1209 
Symbol 
ID6872451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1201430 
End bp1202533 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content46% 
IMG OID642784388 
Productputative oxidoreductase YjhC 
Protein accessionYP_002215061 
Protein GI198245130 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.016444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.354705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAT ACGGTGTTGT AGGTACAGGT TATTTTGGCG CTGAACTGGC GCGATTTATG 
TCTAAGGTTG AAGGGGCGAA AATCACTGCG ATTTACGATC CGGTAAATGC GGCTCCGATA
GCGAAAGAGT TGAACTGTGT CGCCACTGCA ACGATGGAGG CGCTTTGTTC CCATCCTGAT
GTGGATTGCG TAATTATTGC TTCACCAAAT TACTTACATA AAGCGCCAGT CATTGCGGCG
GCTAAAGCGG GTAAACACGT GTTTTGTGAA AAACCTATCG CCTTAAATTA CCAGGATTGT
AAGGATATGG TTGATGCCTG CAAAGAAGCT GGTGTTACCT TTATGGCGGG TCACGTTATG
AACTTTTTTC ACGGGGTTCG CCACGCTAAA GCGCTCATCA AAGCTGGTGA AATTGGTGAA
GTTACACAAG TTCACACTAA ACGTAATGGT TTTGAAGACG TGCAGGATGA GATCTCATGG
AAGAAGATTC GCGCAAAGTC AGGTGGGCAT CTGTACCATC ACATTCACGA GCTAGATTGT
ACACTGTTCA TCATGGATGA AACCCCATCC CTGGTTTCAA TGGCGGCGGG GAATGTTGCG
CACAAAGGTG AAAAATTTGG TGATGAAGAT GATGTTGTCC TAATCACCCT TGAGTTTGAA
AGCGGTCGTT TCGCGACACT TCAGTGGGGA TCATCGTTCC ACTACCCTGA GCACTATGTA
TTAATTGAGG GCACGACAGG TGCAATTCTC ATTGATATGC AAAACACGGC TGGTTATCTA
ATAAAAGCGG GCAAAAAAAC ACACTTTCTT GTGCATGAAA GCCAGGCGGA GGATGATGAT
CGTCGCAACG GTAACATATC CAGCGAGATG GATGGCGCAA TCGCTTATGG TAAACCCGGT
AAACGTACGC CGATGTGGCT CTCATCAATT ATGAAACTGG AGATGCAGTA CTTGCATGAT
GTGATAAACG GTCTGGAGCC AAGCGAGGAG TTTGCTAAAT TGCTAACGGG AGAAGCGGCG
ACAAATGCTA TTGCTACCGC TGATGCTGCG ACGCTTTCCT CAAACGAGGG GCGCAAAGTT
AAACTCACTG AAATTCTTGG CTAA
 
Protein sequence
MTKYGVVGTG YFGAELARFM SKVEGAKITA IYDPVNAAPI AKELNCVATA TMEALCSHPD 
VDCVIIASPN YLHKAPVIAA AKAGKHVFCE KPIALNYQDC KDMVDACKEA GVTFMAGHVM
NFFHGVRHAK ALIKAGEIGE VTQVHTKRNG FEDVQDEISW KKIRAKSGGH LYHHIHELDC
TLFIMDETPS LVSMAAGNVA HKGEKFGDED DVVLITLEFE SGRFATLQWG SSFHYPEHYV
LIEGTTGAIL IDMQNTAGYL IKAGKKTHFL VHESQAEDDD RRNGNISSEM DGAIAYGKPG
KRTPMWLSSI MKLEMQYLHD VINGLEPSEE FAKLLTGEAA TNAIATADAA TLSSNEGRKV
KLTEILG