Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A1184 |
Symbol | |
ID | 6873734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 1174832 |
End bp | 1175770 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642784367 |
Product | hypothetical protein |
Protein accession | YP_002215040 |
Protein GI | 198244580 |
COG category | [R] General function prediction only |
COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.454462 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAA AAAGCGTCGC TATGCTGGCG GTTTGTATGC TGGCGCAAAG CCACCTTGCC ATTGCTGCCG GTACTCCTGC GCCTCAAGAG ATCAACATTG TTTTACTGGG CACCAAAGGC GGGCCTTCTT TGCTCAATAC AGCCAGACTA CCGCAAGCGA CGGCGCTCAC TATCGGCGAT AAAATATGGC TGATAGATGC CGGCTACGGC GCCAGTCTGC AACTGGTGAA AAACGGCATT CCACTGCGCA ACATCAATAC TATTTTGCTC ACCCATCTGC ACAGCGACCA CATACTGGAT TATCCTTCCT TGCTGATGAA TGCCTGGGCA AGTGGTCTGA AAGACCATAC CATACAGGTG TATGGCCCGC CGGGAACCCA GGCGATGACG AAGGCTAGCT GGAAGGTCTT TGACAGGGAT ATCACGCTAC GCATGGAGGA AGAGGGGAAA CCCGATCCGC GCAACCTGGT TAAGGCGACC GATATTGGCC AGGGCGTCAT CTATAAAGAT GAACTGGTCA CAATAAGCGC GCTAAAAGTG CCTCATTCCC CTTTCCCGGA CGGTGAAGCG TTTGCTTACC GTTTTGATAC CCAGGGTAAG CGAATCGTCT TCTCTGGCGA TACGTCCTGG TTTCCGCCGC TTACAACGTT TGCCCAAGGG GCGGATATCC TGGTACATGA GGCGGTACAT GTCCCTTCGG TAGCAAAACT GGCTAATAGT ATTGGCAACG GAAAAACGCT GGCTGAAGCG ATTGCGTCGC ATCACACCAC GATTGAAGAT GTCGGTAAGA TTGCTCGCGA GGCCCACGTG AAAAAACTGG TGTTAAGTCA TCTGGTGCCT GCGACGGTTG CGGATGACGT CTGGCAACAG GAAGCCATGA AAAATTACCC GGGCCCTGTC ATTGTCGGTC ATGACAATAT GACGATAAGC GTACCGTAG
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Protein sequence | MMKKSVAMLA VCMLAQSHLA IAAGTPAPQE INIVLLGTKG GPSLLNTARL PQATALTIGD KIWLIDAGYG ASLQLVKNGI PLRNINTILL THLHSDHILD YPSLLMNAWA SGLKDHTIQV YGPPGTQAMT KASWKVFDRD ITLRMEEEGK PDPRNLVKAT DIGQGVIYKD ELVTISALKV PHSPFPDGEA FAYRFDTQGK RIVFSGDTSW FPPLTTFAQG ADILVHEAVH VPSVAKLANS IGNGKTLAEA IASHHTTIED VGKIAREAHV KKLVLSHLVP ATVADDVWQQ EAMKNYPGPV IVGHDNMTIS VP
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