| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1177 |
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| Symbol | hpaE |
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| ID | 6871178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 1168005 |
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| End bp | 1169471 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642784360 |
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| Product | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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| Protein accession | YP_002215033 |
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| Protein GI | 198245087 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR02299] 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.585771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAA TAAATCATTG GATTAACGGC AAAAACGTTG CAGGTAACGA CTACTTCCAG
ACCACTAACC CGGCGACCGG TGACGTGCTG GCGGAAGTAG CCTCCGGCGG TGAAGCAGAA
GTGAACCAGG CTGTCGCGGC GGCCAAAGAG GCGTTCCCGA AATGGGCCAA TCTGCCGATG
AAAGAGCGCG CGCGCCTGAT GCGTCGTCTG GGTGACCTGA TTGACCAGAA CGTACCGGAA
ATCGCGGCGA TGGAAACCGC CGACACCGGT CTGCCTATTC ACCAGACTAA AAACGTGCTG
ATCCCGCGCG CCTCGCATAA CTTCGAATTC TTCGCCGAAG TGTGCCAGCA GATGAACGGC
AAGACCTATC CTGTTGACGA TAAAATGCTC AATTATACGC TGGTGCAGCC CGTCGGCGTC
TGCGCGCTGG TGTCGCCGTG GAACGTGCCG TTTATGACCG CGACCTGGAA AGTCGCGCCG
TGCCTGGCGC TGGGCAACAC CGCGGTGCTC AAAATGTCCG AGCTGTCGCC GTTGACTGCC
GACAGGCTGG GCGAGCTGGC GCTGGAGGCA GGAATTCCGG CAGGGGTGCT GAACGTGGTG
CAGGGCTACG GCGCGACGGC GGGCGATGCG CTGGTACGCC ACCATGACGT ACGTGCGGTG
TCGTTTACCG GCGGTACCGC CACCGGTCGC AATATCATGA AAAATGCCGG CCTGAAAAAA
TACTCGATGG AGCTGGGCGG CAAATCGCCG GTGCTGATTT TTGAAGATGC CGACATTGAG
CGCGCGCTGG ACGCCGCGCT GTTCACCATC TTCTCGATCA ACGGCGAACG CTGCACCGCC
GGGTCGCGCA TCTTTATCCA GCAGAGCATT TACCCTGAGT TCGTGAAGCG CTTTGCCGAA
CGCGCGAATC GCCTGCGTGT CGGCGATCCG ACCGACCCGA ACACCCAGGT CGGCGCGCTG
ATTAGCCAAC AGCACTGGGA AAAAGTCTCC GGTTATATCC GCCTCGGCAT TGAAGAGGGC
GCAACGCTGC TGGCGGGCGG TGCGGAAAAA CCCACTGACC TGCCTGCGCA TCTGAAAGGC
GGTAACTTCC TGCGCCCAAC CGTGCTGGCC GATGTCGACA ACCGTATGCG CGTCGCGCAG
GAAGAGATCT TTGGGCCAGT CGCCTGTCTG CTGCCATTCA AAGACGAAGC GGAAGGGTTA
CGTTTGGCGA ACGACGTGGA ATACGGTCTG GCCTCTTATA TCTGGACCCA GGACGTGAGC
AAAGTGTTGC GCCTGGCGCG TGCGATTGAA GCCGGCATGG TCTTCGTCAA CACCCAGAAC
GTCCGCGACC TGCGCCAGCC GTTCGGCGGC GTGAAAGCCT CCGGTACCGG GCGCGAAGGC
GGCGAATATA GCTTCGAAGT GTTTGCGGAA ATGAAAAACG TCTGCATCTC AATGGGCGAC
CATCCTATCC CAAAATGGGG AGTTTGA
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| Protein sequence | MKKINHWING KNVAGNDYFQ TTNPATGDVL AEVASGGEAE VNQAVAAAKE AFPKWANLPM
KERARLMRRL GDLIDQNVPE IAAMETADTG LPIHQTKNVL IPRASHNFEF FAEVCQQMNG
KTYPVDDKML NYTLVQPVGV CALVSPWNVP FMTATWKVAP CLALGNTAVL KMSELSPLTA
DRLGELALEA GIPAGVLNVV QGYGATAGDA LVRHHDVRAV SFTGGTATGR NIMKNAGLKK
YSMELGGKSP VLIFEDADIE RALDAALFTI FSINGERCTA GSRIFIQQSI YPEFVKRFAE
RANRLRVGDP TDPNTQVGAL ISQQHWEKVS GYIRLGIEEG ATLLAGGAEK PTDLPAHLKG
GNFLRPTVLA DVDNRMRVAQ EEIFGPVACL LPFKDEAEGL RLANDVEYGL ASYIWTQDVS
KVLRLARAIE AGMVFVNTQN VRDLRQPFGG VKASGTGREG GEYSFEVFAE MKNVCISMGD
HPIPKWGV
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