Gene SeD_A1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1172 
SymboluraH 
ID6872224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1162950 
End bp1163360 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content49% 
IMG OID642784355 
Producthydroxyisourate hydrolase 
Protein accessionYP_002215028 
Protein GI198244374 
COG category[R] General function prediction only 
COG ID[COG2351] Transthyretin-like protein 
TIGRFAM ID[TIGR02962] hydroxyisourate hydrolase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAC ATATACTGGC TACCGTGATA GCATCTCTTG TTGCAGCCCC GGCAATGGCG 
CTGGCCGCTG GCAACAATAT TCTCAGCGTA CATATTCTCG ATCAGCAAAC AGGCAAACCG
GCGCCCGGCG TGGAGGTGGT ACTGGAGCAG AAAAAGGATA ACGGATGGAC GCAATTAAAC
ACCGGGCATA CCGACCAGGA TGGACGTATT AAAGCACTGT GGCCCGAAAA AGCTGCCGCG
CCGGGGGATT ATCGCGTTAT TTTTAAAACC GGCCAGTATT TTGAAAGTAA AAAACTGGAT
ACGTTTTTCC CGGAGATTCC CGTCGAGTTT CATATCAGCA AAACGAATGA GCACTATCAT
GTGCCGCTGT TATTAAGTCA GTATGGTTAT TCAACCTATC GCGGGAGCTA A
 
Protein sequence
MKRHILATVI ASLVAAPAMA LAAGNNILSV HILDQQTGKP APGVEVVLEQ KKDNGWTQLN 
TGHTDQDGRI KALWPEKAAA PGDYRVIFKT GQYFESKKLD TFFPEIPVEF HISKTNEHYH
VPLLLSQYGY STYRGS