Gene SeD_A1169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1169 
Symbol 
ID6871524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1159135 
End bp1160697 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content48% 
IMG OID642784352 
Productpeptidase family C69 
Protein accessionYP_002215025 
Protein GI198242775 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4690] Dipeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.451747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCAA AGAATATTGC TGGCTCGATC ACTTTCTCGG TTTCCAATCC AGGGTCAATT 
CATCCCATAA CGCGTTATTC AGTGGGAACC TTTATGAAAA AGTATCTTGC ATTCGCCGTT 
ACGCTGCTGG GTATGGGTAA AGTCATCGCC TGTACTACCC TTTTGGTAGG CAATCAGGCT 
TCGGCTGACG GCTCCTTCAT TATCGCGCGC AACGAAGATG GCTCGGCAAA TAACGCCAAG 
CATAAGGTTA TTCATCCCGT CGCGTTTCAT CAACAAGGCG AGTATAAAGC ACATCGCAAC 
AATTTTAGCT GGCCGCTTCC GGAGACAGCG ATGCGCTATA CGGCGATTCA TGACTTTGAT 
ACTAACGATA ACGCCATGGG TGAAGCCGGT TTCAATTCGG CGGGCGTCGG AATGAGCGCA 
ACGGAAACCA TTTATAACGG CAGAGCGGCG CTGGCTGCCG ATCCTTACGT GACAAAAACA 
GGAATCACGG AAGACGCCAT TGAGTCCGTG ATCCTGCCAG TGGCGCAATC GGCGCGTCAG 
GGCGCCAAAT TACTGGGAGA CATTATTGAA CAAAAAGGCG CGGGCGAAGG TTTCGGCGTC 
GCGTTTATTG ATAGCAAAGA GATATGGTAT CTGGAGACGG GAAGCGGTCA TCAATGGCTG 
GCAGTACGAC TTCCGGCAGA TAGCTATTTC GTTTCCGCCA ATCAGGGACG TTTACGCCAT 
TACGATCCGA ATGATAACGC GAATTATATG GCGTCACCAA CGTTAGTAAG CTTTGCGAAA 
AAGCAGGGAT TATATGATCC GGCCCGCGGC GAATTCGACT TTCATCAAGC CTATTCACAG 
GATAACAAAA ACGATACCAC CTATAATTAT CCGCGCGTCT GGACGCTACA ACACCAGTTT 
AATCCGCATC TGGATACGGT CGTTAGCGAA GGGGAAACAT TTCCTGTTTT TTTAACGCCA 
ATAACGAAGA TCAGCGTGGC GGCAGTAAAA AACGCGTTAC GCAATCACTA TCAGGGAACG 
TCGCACGACC CTTATGCCAG TCATAATCCA CAAGAACCAT GGCGACCTAT ATCCGTTTTT 
CGTACCCAGG AGTCACATAT TTTACAGGTC AGACCGAAAT TACCGCAGGC TATCGGCAAC 
GTAGAATACA TCGCCTATGG AATGCCATCT CTTAGCGTCT ATCTCCCCTA TTATCAGGGG 
ATGCGTCATT ATCAACCCGG AGATGATAAA GGAACCGATC GGGCGAGCAA CGACTCTACC 
TACTGGACAT TCCGCACGCT GCAAACGCTG GTTATGCAGG ACTACAATGC GTTTGCGCCA 
GATGTGCAAC ACGCCTGGAA AACATTTGAA CAGCAAACAG CTAAGCAGCA GTATAAGATG 
GAGCAGAGCT ATCTGAGATT ATATGCGTCG CATCCGAAAG AAGCGCAACG CTTACTGCAA 
AATTTTGAAG ATAAAACGAT GCAAAATGCG CAGACGCTCG CCCGTCGCCT GACCAATAAT 
ATTACTACGA CAATGACTTA CCGTACAGAT ATGAAATATC ACTTTTCAAG TACGCAACCA 
TAA
 
Protein sequence
MPAKNIAGSI TFSVSNPGSI HPITRYSVGT FMKKYLAFAV TLLGMGKVIA CTTLLVGNQA 
SADGSFIIAR NEDGSANNAK HKVIHPVAFH QQGEYKAHRN NFSWPLPETA MRYTAIHDFD 
TNDNAMGEAG FNSAGVGMSA TETIYNGRAA LAADPYVTKT GITEDAIESV ILPVAQSARQ 
GAKLLGDIIE QKGAGEGFGV AFIDSKEIWY LETGSGHQWL AVRLPADSYF VSANQGRLRH 
YDPNDNANYM ASPTLVSFAK KQGLYDPARG EFDFHQAYSQ DNKNDTTYNY PRVWTLQHQF 
NPHLDTVVSE GETFPVFLTP ITKISVAAVK NALRNHYQGT SHDPYASHNP QEPWRPISVF 
RTQESHILQV RPKLPQAIGN VEYIAYGMPS LSVYLPYYQG MRHYQPGDDK GTDRASNDST 
YWTFRTLQTL VMQDYNAFAP DVQHAWKTFE QQTAKQQYKM EQSYLRLYAS HPKEAQRLLQ 
NFEDKTMQNA QTLARRLTNN ITTTMTYRTD MKYHFSSTQP