Gene SeD_A1164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1164 
Symbol 
ID6874601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1154947 
End bp1155822 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content40% 
IMG OID642784347 
Producthypothetical protein 
Protein accessionYP_002215020 
Protein GI198243562 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.919275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATAA CTAACGCGTC CCCAGAAAAT ATATTAAGAT ATTTGCATGC GGCCGGTACC 
GGTACGAAAG AAGCAATGAA AAGTGCAACT TCACCACGCG GTATACTGGA ATGGTTTGTC 
AATTTTTTTA CCTGTGGTGG AGTAAGAAGA AGCAATGAAA GATGCTTTCG GGAGGTAATT 
GGAAAACTGA CCACATCATT ATTATATGTA AATAAAGATG CTTTCTTCGA TGGTAATAAA 
ATATTTCTGG AGGATGTCAA CGGGTGTACT ATATGTCTGT CATGTGGAGC AGCATCCGAA 
AATACGGCTC CCATGGTCAT TATTGAAGTG AACAAAAATG GAAAAACTGT AACGGATAAA 
GTTGATAGCG AGAGATTTTG GAATGTATGT CGAATGTTAA AACTGATGAG TCAACATAAT 
ATACAACAGC CTGATTCACT TATAACCGAG GATGGTTTTC TGAACCTGCG CGGAGTAAAC 
CTGGCTCATA AAGATTTCCA GGGGGAAGAT TTGTCAGACA TAGATGCTTC TGATGCAGAT 
TTCCGTGAAA CAAATCTATC TAATGTAAAT TTAGTCGGTG CAAATTTGTG TTGTGCAAAT 
CTACACGCTG TAAATCTAAT GGGTTCAAAC ATGACTAAAG CAAACCTGAC TCACGCAGAC 
CTGACTTGCG CTAACATGTC CGGTGTAAAC TTAACCGCTG CAATTCTATT CGGCTCAGAC 
TTAACTGACA CCAAACTAAA TGGTGCGAAA TTAGATAAGA TAGCTCTAAC TTTAGCGAAA 
GCATTAACAG GAGCCGATCT GACAGGTAGT CAACATACCC CTACTCCACT CCCGGATTAC 
AATGATAGAA CTCTTTTCCC CCATCCGATA TTTTAG
 
Protein sequence
MPITNASPEN ILRYLHAAGT GTKEAMKSAT SPRGILEWFV NFFTCGGVRR SNERCFREVI 
GKLTTSLLYV NKDAFFDGNK IFLEDVNGCT ICLSCGAASE NTAPMVIIEV NKNGKTVTDK 
VDSERFWNVC RMLKLMSQHN IQQPDSLITE DGFLNLRGVN LAHKDFQGED LSDIDASDAD 
FRETNLSNVN LVGANLCCAN LHAVNLMGSN MTKANLTHAD LTCANMSGVN LTAAILFGSD 
LTDTKLNGAK LDKIALTLAK ALTGADLTGS QHTPTPLPDY NDRTLFPHPI F