Gene SeD_A1160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1160 
Symbol 
ID6874301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1152747 
End bp1153406 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content53% 
IMG OID642784343 
Producthypothetical protein 
Protein accessionYP_002215017 
Protein GI198246177 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.572482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.332109 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGTA TCATTACATC ATCGCGTGAT CGTAGCTCGC TACTGAGTAC GCACAAAGTA 
CTGCGCAACA CCTATTTTCT GTTGAGCCTG ACGCTGGCTT TCTCCGCAAT TACCGCGACA
GCCAGTACGG TACTGATGCT GCCCTCCCCC GGCCTGATTC TGACGCTGGT CGGTATGTAT
GGGCTGATGT TCCTGACCTA TAAAACCGCC AATAAGCCGG TCGGTATCCT GTCTGCTTTT
GCGTTTACCG GCTTCCTCGG GTATATCCTG GGCCCGATTC TTAACGCCTA TCTGTCAGCA
GGCATGGGCG ATGTCATTGG CCTGGCGCTG GGTGGTACCG CGTTAGTATT TTTCTGCTGC
TCCGCTTACG TTCTGACCAC CCGTAAGGAT ATGTCTTTCC TGGGCGGTAT GTTAATGGCC
GGGATCGTCG TCGTGCTGAT TGGTATGGTG GCGAATATTT TCCTGCAACT GCCTGCATTG
CACCTGGCGA TTAGCGCGGT GTTTATCCTG ATTTCCTCGG GCGCTATCCT GTATGAAACC
AGTAACATCA TTCACGGCGG TGAAACCAAC TATATTCGTG CGACCGTCAG TCTGTACGTT
TCGCTGTACA ACATCTTTGT CAGCCTGCTC AGCATTCTGG GCTTCGCCAG CCGCGACTAA
 
Protein sequence
MDRIITSSRD RSSLLSTHKV LRNTYFLLSL TLAFSAITAT ASTVLMLPSP GLILTLVGMY 
GLMFLTYKTA NKPVGILSAF AFTGFLGYIL GPILNAYLSA GMGDVIGLAL GGTALVFFCC
SAYVLTTRKD MSFLGGMLMA GIVVVLIGMV ANIFLQLPAL HLAISAVFIL ISSGAILYET
SNIIHGGETN YIRATVSLYV SLYNIFVSLL SILGFASRD