Gene SeD_A1154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1154 
Symbol 
ID6874677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1148850 
End bp1149167 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content55% 
IMG OID642784337 
Productheat shock protein HspQ 
Protein accessionYP_002215011 
Protein GI198244755 
COG category[S] Function unknown 
COG ID[COG3785] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02097] hemimethylated DNA binding domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.403782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.968982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGCCA GCAAATTCGG TATCGGCCAA CAGGTCCGCC ATTCCCTGTT AGGTTACCTC 
GGAGTGGTCG TCGATATCGA CCCGGAATAT TCGCTTGATG AGCCGTCGCC TGATGAACTG
GCGGTTAACG ACGAACTTCG CGCCGCTCCG TGGTACCACG TGGTAATGGA AGATGATGAT
GGTCAGCCAG TGCATACTTA TCTGGCCGAG GCCCAGTTGC GAAGCGAAAT GCGGGACGAG
CATCCAGAAC AGCCATCGAT GGATGAACTG GCGCGTACCA TTCGCAAGCA GCTTCAGGCA
CCGCGACTAC GTAACTGA
 
Protein sequence
MIASKFGIGQ QVRHSLLGYL GVVVDIDPEY SLDEPSPDEL AVNDELRAAP WYHVVMEDDD 
GQPVHTYLAE AQLRSEMRDE HPEQPSMDEL ARTIRKQLQA PRLRN